KEGG   Saprolegnia parasitica: SPRG_19997
Entry
SPRG_19997        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
spar  Saprolegnia parasitica
Pathway
spar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPRG_19997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_19997
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SPRG_19997
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SPRG_19997
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 24141240
NCBI-ProteinID: XP_012200527
UniProt: A0A067CDG1
LinkDB
Position
Unknown
AA seq 110 aa
MTELLDKQMLVVLRDGRHLVGVFRSFDQYSNIVLQDTCERHVVGNTYCDIPLGLYIIRGE
NIVIMGELDQEKEASQVNLIKKTPEEVLAAEADLHDTGAVTVRGTWNFDD
NT seq 333 nt   +upstreamnt  +downstreamnt
atgaccgagctcctcgacaagcagatgctcgtcgtcctgcgcgacggccgccacctcgtc
ggcgtcttccgcagctttgaccaatattccaacattgttctgcaagacacatgcgagcgc
cacgtcgtcggcaacacgtactgcgatatcccgttggggctctacatcattcgcggcgaa
aacattgtcatcatgggcgaattggaccaggagaaggaggcgagccaggtcaacttgatc
aagaagacgccggaagaagtcctcgcggccgaggccgacctccacgacacgggcgcggtc
acggtccgtggcacgtggaactttgacgactaa

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