Saprolegnia parasitica: SPRG_20381
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Entry
SPRG_20381 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spar03016
]
SPRG_20381
Enzymes [BR:
spar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SPRG_20381
Transfer RNA biogenesis [BR:
spar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPRG_20381
Prokaryotic type
SPRG_20381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
UL21a
DUF4007
Motif
Other DBs
NCBI-GeneID:
24141534
NCBI-ProteinID:
XP_012201611
UniProt:
A0A067CAH2
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MSSNNNSNNSRGGRGGGRGGRGRGRGGGFRGGRGGGRGGGRGDVPWFRQEGYNDAVASSV
DETEVGIKVFVNDRKGFNGIVKQRFSDFIVREVAMNGNDIARLTELELPPQGKKNRTVHT
LLFDAMERYLGLSFAKSTASKQHRYLETTSDLPSASSGLESIFDVLSKRLVELFVANREN
GASYAAKRQAKLFVAEVASALDAAEATKLDAFLHQVIATTDATAKAELVYHFQPLEKKDD
RTALHGLIREYGKELVVADTTSEAGNDAATVIRLRPLTKNGGKRKDMDHRSSRTDANWPH
NRRTSLFYHVQENKETVEAMQHMAKILHLNDGVFTYAGTKDKRGLTTQWVTAYKVPRETI
ARINNNYDMYAFLVGNFSYVNDPLTLGDLYGNQFGLVLRNIPDDVSDDDIAAAVHAWTNM
GFVNYFGLQRFGTKSIPSHTVGRAMLRKDFKGVVDLILGPKDGDASKIREARVHFQQYKD
VDAALRMFPPFLVAENAVLQGFSRHGLDAYERAIRNIPTKLRMIYTHAYQSYIWNEAASY
RLSHYSNTAPVIGDMVLRGDSDIIFVTEDNIGEYSIEDVVLPVHGYSTLLPKNTVAEVYS
RCATQDGVNFESLRKDQSPEYNLPGSYRHILRKPQQVRHEIKRYDDETIPLLPSEVDVLL
NRPTVPSLPNGKFKAICLEFILQSSSYATIAIRELLKQSSSIHVQLQLNEQKAGKAIDTS
NVNKVKSIPIGRPGFSLGKQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaacaacaacagcaacaactctcgaggaggccgtggcggtggtcgcggcggt
cgtggccgtggccgcggcggtggcttccgtggcggccgcggtggcggtcgtggtggcggt
cgcggcgacgtgccgtggtttcgccaagaaggctacaacgacgcggttgcgagcagcgtc
gacgagaccgaggtcggcatcaaggtgttcgtcaacgaccgcaagggcttcaatggcatc
gtcaagcagcgcttctcggactttatcgtgcgcgaagtggccatgaatggcaacgacatt
gcacgcctgaccgagctcgagctgccgccgcaaggcaagaagaaccgcaccgtgcacacg
ctcttgtttgacgcgatggagcgctacctcggcctgtcgttcgccaagtcgacggcctcc
aagcagcaccggtacctcgaaacgacgagcgacctcccgagcgcgtcgtcgggcctcgag
agcatctttgacgtgctctccaagcgtcttgtcgagctctttgttgcgaaccgcgagaac
ggtgcgtcgtatgcggccaagcgccaagcaaagctcttcgtcgccgaggtcgcgtccgcg
ctcgacgctgcggaggcgaccaagctcgacgcattcttgcaccaagtgattgcgacgacc
gatgcgaccgccaaggccgagctcgtgtaccatttccagccgctcgagaagaaggacgac
cgaaccgcgctccacgggctcattcgcgagtacgggaaggagctcgtcgtcgccgacacc
acgtccgaggctggcaatgacgcggcgaccgtcatccgcctccggccgctcaccaagaac
ggtgggaagcgcaaggacatggaccaccgctccagtaggaccgacgccaactggccgcac
aaccgccgtacgtctctcttttatcatgtacaagaaaacaaagagaccgtcgaggcgatg
cagcacatggccaagatcttgcacttgaacgacggcgtgtttacgtatgcgggcacgaag
gacaagcgcggcctcacgacgcagtgggtcacggcgtacaaggtgccgcgcgagaccatt
gcgcgcatcaacaacaactacgacatgtacgcgttccttgtcggcaactttagctatgtg
aacgacccactcacgctcggcgacctctacggcaaccagtttggtctcgtgctccgcaac
atccccgacgacgtctcggacgacgacattgcggccgccgtccacgcgtggaccaacatg
ggttttgtcaactactttggcttgcagcgctttggcaccaagtcgattccgtcccacacg
gtcggtcgcgccatgctgcgaaaagacttcaagggcgtcgtggacctcatccttggcccg
aaagacggcgatgcgagcaagatccgcgaggcgcgcgtgcactttcagcagtacaaggac
gtggacgcagctctgcgcatgttcccgcccttcctcgtcgccgagaacgcggtgctccaa
ggcttttcgcgccacggcctcgacgcgtacgagcgcgcgatccgcaacatcccgaccaag
ctccgcatgatttatacgcacgcgtaccagagttacatctggaacgaagccgcgagctac
cgcttgagccactactccaacacggcgcccgtcattggagacatggtgctacggggtgac
agcgacatcatctttgtgaccgaagacaacattggcgagtactcgatcgaagacgtggtg
ctgcccgtgcacggctactcgacgctgctgcccaaaaacaccgtggccgaggtctacagc
cgctgcgcgacccaagacggcgtgaatttcgagtcgcttcggaaagaccagtcgcccgag
tacaacctcccgggctcgtaccgccacattttgcgcaagccgcagcaagtgcgccacgaa
atcaagcgctacgacgacgagacgatcccgctcttgccgtccgaagtcgacgtcctcttg
aaccgcccgacggtcccgtcgctcccgaacggcaagttcaaggccatctgcctcgagttc
atcctccagtcgtcgagctatgcgacaattgcgatccgagagctcctcaagcagagctcc
agcatccatgtgcagttgcagctcaacgagcaaaaggccggcaaggccatcgacacgtcc
aacgtcaacaaggtcaagtccatcccgatcggtcgaccaggcttctcgctcggcaagcag
taa
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