KEGG   Saprolegnia parasitica: SPRG_20943
Entry
SPRG_20943        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
spar  Saprolegnia parasitica
Pathway
spar03020  RNA polymerase
spar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SPRG_20943
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPRG_20943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spar03021]
    SPRG_20943
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_20943
   03400 DNA repair and recombination proteins [BR:spar03400]
    SPRG_20943
Transcription machinery [BR:spar03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     SPRG_20943
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SPRG_20943
DNA repair and recombination proteins [BR:spar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SPRG_20943
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 24141908
NCBI-ProteinID: XP_012205267
UniProt: A0A067C0H4
LinkDB
Position
Unknown
AA seq 142 aa
MFFLKQLRRELLLHPMHFGPKLHDIIRLRLIEENNAYRAILFRPFKNEVLDAVVTGRETP
LGFFAEVGPLQVFVSRHAMSTDLTEGYDHENSAWISQDREVEIRKGVGVRLKIMGVSIDV
TEINAIGTIKDNYLGVISADMF
NT seq 429 nt   +upstreamnt  +downstreamnt
atgttcttcctcaagcagctccgccgggagctcctcctgcacccgatgcactttggcccg
aagctccatgacatcatccgcctgcgcctcatcgaggagaacaatgcgtaccgcgcgatc
ctcttccgcccgttcaagaacgaggtgctggacgcggttgtgacgggtcgagaaacaccg
ctcggctttttcgccgaggttgggccgctccaggtttttgtgagtcgccacgccatgtcg
accgatttgaccgaaggctacgaccacgagaacagcgcgtggatatcgcaagaccgcgag
gtcgagatccgcaagggcgtcggcgtccgcctcaagatcatgggcgtcagcatcgacgtg
acggagatcaacgccattggcacgatcaaggacaactatttaggcgtcatttcggccgac
atgttttag

DBGET integrated database retrieval system