Staphylococcus pasteuri: STP1_0135
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Entry
STP1_0135 CDS
T02889
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
spas
Staphylococcus pasteuri
Brite
KEGG Orthology (KO) [BR:
spas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spas03019
]
STP1_0135
03009 Ribosome biogenesis [BR:
spas03009
]
STP1_0135
Enzymes [BR:
spas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STP1_0135
Messenger RNA biogenesis [BR:
spas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STP1_0135
Ribosome biogenesis [BR:
spas03009
]
Prokaryotic type
rRNA helicases
STP1_0135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGZ24446
LinkDB
All DBs
Position
complement(161988..163331)
Genome browser
AA seq
447 aa
AA seq
DB search
MAKHPFEHFGLNSSMIEAVKDLKFEKPTEIQNRIIPRILKGTNIIGQSQTGTGKSHSFLL
PLVNEIDTDIHEPQAIVVAPTRELAQQLYQAANHLSSFKEGVNAKLFIGGTDIEKDRQRC
NQQPQLVIGTPTRINDLAKSGHLHTHLASYLIIDEADLMIDLGLIEDVDFIASRLEEHSN
IAVFSATIPKSLQPFLNKYLEQPDFVEVDSQSQNKKNIEFYLIPTKGTAKVEKTLKLIDI
LNPYLCIIFCNSRDSADELARTLNEAGVKVGMIHGGLTPRERKQQMKRIRNLDFQFVIAS
DLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGNYRGVAITLYSPDEEENISAIED
RGYVFENVDIKNDELTPIKAHNTRRTRQRKDDHLTNEVKNKVRSKTKRKVKPGYKKKFKQ
EVERMKRQERKQFSKRQNRQNRKSRKG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacatccatttgaacacttcggtttaaactcaagtatgatcgaagctgtaaaa
gatttaaaatttgagaaacctactgaaattcaaaatagaattattccgagaatattaaaa
ggtaccaacatcattggacaatcacagacaggtacaggtaaatcccattcatttttatta
ccattagttaatgaaattgatacggacattcatgaacctcaagcaatcgttgttgcacct
actagagaattagcacaacaactttatcaagcagctaaccatttaagcagttttaaagaa
ggcgtcaatgctaaactatttatcggcggtacagatattgagaaagatagacaacgttgt
aaccaacaaccacaactagtcattggtacaccaacaagaattaatgatttagctaaaagt
ggtcatttacacacacatttagcctcatatttaatcatagatgaagctgatttaatgata
gatttaggtttgattgaagatgtagactttatcgcttcacgtttagaagaacattcaaat
attgctgtattcagtgcaacaatcccaaaatcattacagccatttttaaataaatattta
gaacaacctgattttgtagaagttgatagccaatcacaaaataaaaagaatattgaattt
tatttaattcctactaaaggaactgcaaaagttgaaaaaacactaaaattaattgatata
ctaaacccttatttatgtattattttctgtaatagtagagacagtgccgatgaattagca
cgaacactcaatgaagctggtgttaaagtaggtatgattcatggtggactaacaccgcgt
gaacgtaaacaacaaatgaaacgtattagaaatctagatttccaatttgtgattgcaagt
gatttagcatcaagaggtattgatattgagggtgtaagccacgtcatcaatttcgatgta
ccaaatgatattgatttctttacgcatagagtgggacgtactggacgaggcaactatcgt
ggtgtagcaattaccttatatagtccagatgaagaggaaaatatttctgcaattgaagat
agaggttatgtctttgaaaatgtggatattaaaaacgatgaacttacgccaatcaaagcg
cataatactagacgcactagacaacgaaaagatgaccatctaactaatgaagttaaaaat
aaagtacgtagtaaaacaaaacgtaaagttaaaccaggttataaaaagaaatttaaacaa
gaagttgaaagaatgaagcgacaagaacgtaaacaatttagtaaacgtcaaaaccgtcaa
aatagaaagagtagaaaaggatag
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