Staphylococcus pasteuri: STP1_0417
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Entry
STP1_0417 CDS
T02889
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spas
Staphylococcus pasteuri
Brite
KEGG Orthology (KO) [BR:
spas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spas03009
]
STP1_0417 (rumA)
Enzymes [BR:
spas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
STP1_0417 (rumA)
Ribosome biogenesis [BR:
spas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STP1_0417 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_31
Cons_hypoth95
Methyltransf_25
TRM5-TYW2_MTfase
PrmA
MTS
TRAM
N6_N4_Mtase
Methyltransf_11
MethyltransfD12
TPMT
Methyltransf_4
PDGF
Motif
Other DBs
NCBI-ProteinID:
AGZ24728
LinkDB
All DBs
Position
complement(476422..477822)
Genome browser
AA seq
466 aa
AA seq
DB search
MICPNLFICGGNKVETLKKNDVLTGQVVDLTHEGHGVVKIDRYPIFIPNTLIDETIEYKV
IKVKKNFAIGKLIKVITESDARVEPPCIYYYKCGGCQLQHMSYQAQLNMKKEQVVNLFHR
KAKFTNTVIKDVVGMEDPWRYRNKSQIPVGLSKDQLPIMGFYRQRSHDIIDMDSCLIQDQ
QHQQVMNDVKQLISDLNISIYNEKTKKGLLRHLVVRTGHYTNQLMIILVTNGKAFKQAES
MVDALVRKYPNITSIKQNINDAHSNVIMGRHSMTIYGEEEIEDQLSEITFNISDQSFYQI
NSHQTEKLYQQALDYAQLTGNEIVLDTYCGIGTIGLYMARNAKHVYGVEVVSSAIKDANR
NATINQLENTTFVCGKAEEVILKWKAEGIRPDVVMVDPPRKGCDETFLETLLELNPKRIV
YISCNPSTQQRDAHILNHQYDLKEITPVDMFPQTTHIETVALFERK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatatgtcctaacctttttatatgtgggggaaataaagtggaaacattgaagaaaaat
gatgtactaacaggccaggttgtagatttaacacatgaaggccatggcgttgtaaaaatt
gatagatatccgatatttatcccaaatacgttaatagacgagacgatcgaatataaagtg
attaaagtaaagaaaaactttgcaattggaaaattaataaaagtgattactgaaagtgat
gctagagtagagccgccatgtatatattattataagtgcgggggatgccaacttcagcat
atgtcttatcaagcacaactcaatatgaaaaaagaacaggtagttaatttattccataga
aaagcaaaatttacaaatacagttatcaaagatgttgttggcatggaagacccttggcga
tatagaaataaatcccaaattccagttggtttaagtaaggatcagttacccataatgggg
ttttatcgtcaacgaagtcatgacatcattgatatggatagttgtttaattcaagatcaa
caacatcaacaagtgatgaacgatgttaaacaacttatatcggatttaaatataagtatt
tataatgaaaagactaaaaaaggattacttcgtcatttagtagtgagaacaggacattat
acgaatcaattaatgattatattagtgactaatggtaaggcattcaaacaagctgaatct
atggtagatgcactagttcgaaaatatcccaatatcacaagtattaaacaaaatattaat
gatgcgcattcaaatgtgatcatgggacgtcactccatgacgatttatggtgaagaagaa
atcgaagatcaattaagcgaaatcactttcaatattagtgatcaatcattctatcaaata
aattcacatcaaacagaaaaattatatcaacaagcattagattatgcccaattaacaggt
aatgaaattgttcttgatacatactgtggtatcggaacaattggtttgtacatggctaga
aatgctaaacacgtttatggtgtcgaagtggtatcatctgcgattaaagatgcaaatcga
aatgcgactataaaccaattagaaaatacaacttttgtctgtgggaaagctgaagaagtt
attttaaaatggaaagcagaaggaataagaccagatgttgttatggtcgatccaccaaga
aagggttgcgatgaaacgttcttagaaacattattagaacttaatcctaaacgaattgta
tatatatcatgtaatccgtctacgcaacaacgtgatgcacacatacttaatcatcaatat
gatttaaaagaaataacacctgttgatatgttcccgcaaacaacgcatattgaaacagtg
gcattatttgaaagaaaataa
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