Staphylococcus pasteuri: STP1_0555
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Entry
STP1_0555 CDS
T02889
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
spas
Staphylococcus pasteuri
Pathway
spas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STP1_0555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spas03021
]
STP1_0555
03019 Messenger RNA biogenesis [BR:
spas03019
]
STP1_0555
Transcription machinery [BR:
spas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
STP1_0555
Messenger RNA biogenesis [BR:
spas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STP1_0555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
Mor
AAA_25
AAA_24
AAA
YopJ_bacilli
Motif
Other DBs
NCBI-ProteinID:
AGZ24866
LinkDB
All DBs
Position
complement(619128..620444)
Genome browser
AA seq
438 aa
AA seq
DB search
MPERERTSPQYESFHELYKNNTTKELTQKAKSLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDQNAEEVKKRPHFQALTPLYPEERILLETEPRNYSTRIMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAIITNKPEAKLFVLLVGERPEEVTDIERSVESAEVVHST
FDEPPQHHVKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLSE
RRIFPAIDIGRSSTRKEELLISKAELDTLWQLRNLFTDSTDFTERFIRKLKRSKNNKDFF
EQLQKSAEESTKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgagaacgaacttctcctcaatatgaatctttccacgaactatacaaaaac
aacactactaaagaactcactcaaaaagctaaatctttaaaattaactaattatagtaaa
ttgaataagaaagaacttgtattagctatcatggaagctcaaatggagaaagatggcaat
tattacatggagggtattttagatgatatccaacccgatggttatggtttcttaagaact
gtcaattattctaagggtgaaaaagacatctatatttcagcaagtcaaattcgtcgtttt
gaaattaaaagaggcgataaagtaacaggtaaagtacgtaaaccgaaagataatgagaaa
tattatggattactacaagtggactttgttaacgatcaaaatgctgaagaagtcaaaaaa
cgtcctcacttccaagcgttgacgcctttgtatccagaagaacgaattttacttgaaact
gaaccaagaaattattctacacgtatcatggatttagtaacacctattggtttaggacaa
cgtgggctcattgtagcgccacctaaggcaggtaaaacatcattacttaaagaaattgct
aatgcaattattaccaataaaccagaagctaaattatttgttttgttagttggtgagaga
cctgaagaggtcactgatattgaacgttcagtagaatcagctgaagttgtacattcaacg
tttgatgaaccaccacaacatcacgtaaaagttgcagaactattgttagagagagctaag
cgtcttgtagaaataggcgaagatgtcattatattaatggactcaatcactcgattagct
cgagcttataacttagtcattccacctagcggccgtacactttctggtggtcttgatcca
gcatctctgcataaaccaaaagccttttttggcgcagctcgaaatatagaagcaggtggc
agtttaactattttagctacagcattagtagatacaggttcgagaatggacgatatgatt
tatgaagaattcaaaggtactggtaatatggagcttcatttagatcgtaaattatctgaa
agacgtatcttcccagctatagacattggccgaagttctacacgtaaagaagaattgcta
attagcaaggctgaattagatacattgtggcaacttcgtaatcttttcacagattctact
gatttcactgagagatttattcgtaagttaaaacgttcaaaaaataataaagatttcttt
gaacaactacaaaaatcggcagaagaaagcacaaaaacaggtaaacctattatttaa
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