Streptococcus pantholopis: A0O21_10350
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Entry
A0O21_10350 CDS
T05054
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
spat
Streptococcus pantholopis
Pathway
spat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A0O21_10350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spat03021
]
A0O21_10350
03400 DNA repair and recombination proteins [BR:
spat03400
]
A0O21_10350
Enzymes [BR:
spat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A0O21_10350
Transcription machinery [BR:
spat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A0O21_10350
DNA repair and recombination proteins [BR:
spat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A0O21_10350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AND80339
UniProt:
A0A172QA26
LinkDB
All DBs
Position
2203950..2207594
Genome browser
AA seq
1214 aa
AA seq
DB search
MVDVNRFKSMQITLASPNKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIICDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPLDTPLEPKSLLTEREYREKLQEYGQGSFIAKMGAEAIQDLL
KRVDIQAEIAELKEELKTATGQKRVKAVRRLDVLDAFQKSGNKPEWMVLNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDYAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDFGREGEGMIFKDRDEAVMAYRNGYVHLHSRVGI
AVDSMPNKPWTDDQKHKIMVTTVGKILFNDIMPEDLPFLQEPNNANLTEKTPDKYFLEPG
QDIQTVLASLELNQPFKKKNLGNIIAETFKRFRTTETSAFLDRLKNLGYYHSTLAGLTVG
IADIPVINNKAEIIEAAHHKVEEINKAFRRGLMTDDDRYIAVTATWREAKEELEKRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLDITAITDGKEVTETL
AERLVGRYTKKSVKDPKTGELIVPANTLLTEDMADAIAKAGVEKVTIRSVFTCNTRHGVC
RHCYGINLATGDAVEVGEAVGTVAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGQIADIEEDAATRTKKVFVQGETGTGEYVVPFTARMKVEIGDT
VHRGDALTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHIEVMVRQMLRK
VRIMDPGDTDLLPGTLMDIADFTDANREIVITGGVPATSRPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKQDHLLGLKENVIIGKIIPAGTGMARYRNIEPQAVNEIEIMDDV
ETIDIVETETLAAE
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgatttaaaagtatgcaaatcacattggcttcacctaacaaagtc
cgttcttggtcttatggtgaagttaagaaacctgaaacaatcaactaccgtacattaaag
ccggagcgtgaaggtctgtttgatgaggttatttttggtcctactaaggactgggagtgt
gcctgcggcaaatataagcgtattcgatacaaaggcattatctgcgaccgctgcggtgtg
gaagttacacgggctaaggttcgccgtgaacgaatgggacatatagaattaaaagcaccg
gtttcacatatctggtactttaaaggaattcccagccgtatggggctgacgcttgatatg
agtccgcgggcgcttgaagaagttatctattttgcagcttatgttgttattgatccgctg
gacactccgctggagccaaaatcacttttgactgagcgtgagtaccgtgagaagctgcag
gaatacggtcagggttcctttattgccaagatgggagctgaagcgattcaggatttgctt
aagcgggttgatattcaagcagagattgcagagcttaaagaagaactcaaaacagcaacc
ggtcaaaaacgggttaaggcagtccgccgtctggatgttttggatgctttccagaaatct
ggcaacaagccggaatggatggtcttaaatatcctgccggtcattccgccggatttgcgc
ccgatggtacagctggacggaggccgttttgcagcctcagatttaaacgacctatacagg
cgtgttatcaatcgtaataatcgtctggcccgtttgttggaacttaatgctccgggaatt
attgttcaaaatgaaaaacggatgctccaagaagcggtggatgcgcttattgataacggc
cgccggggacgccctattactggtccggggagccgtccactcaaatcactcagccatatg
ctaaaagggaaacaagggcgtttccgtcaaaatttgcttgggaagcgtgttgatttttct
ggccgttcggttattgctgtcggaccgaccttgaaaatgtatcagtgcggcgttccgagg
gaaatggctattgagctctttaagccttttgtcatgcgcgaaatcgtagcgcgggactat
gccggaaatgtcaaagcggctaagcggatggttgagcgcggtgatgaacgcatttgggac
attttggaagaggtcattaaagaacatccagtcctcttgaaccgggcaccaactttacac
agactgggaattcaagcgtttgaaccggtccttattgatggtaaagctctgcgtctgcat
ccgcttgtttgtgaggcttataatgccgattttgacggagaccagatggctatccatgtc
ccgctttcagaagaagcgcaggctgaggcccgcttgttaatgctggctgctgagcatatc
ctcaaccctaaagacggcaagcctgtcgttacgccgtctcaggatatggtgctggggaat
tactatttgaccatggaagattttggccgtgaaggtgaaggcatgattttcaaggaccgc
gatgaagcggtgatggcctaccgaaatggctatgttcacctgcacagccgggtggggatt
gctgttgacagtatgccaaacaaaccttggaccgatgatcaaaagcataaaattatggtc
acaacagtcggtaaaattctctttaatgatattatgcctgaggatcttcctttccttcag
gaacccaacaatgccaatctgacggaaaaaacaccagataaatatttcttagagccgggg
caggatattcagacagtgcttgcttctttggaactcaatcagccctttaagaagaaaaac
ttgggaaatattattgcggagacctttaaacgcttccggacaacagagacatcggctttt
cttgaccgcttaaagaatctgggttattaccattctactcttgctggattgacagtggga
attgccgatattccggttattaataacaaggctgaaattatagaagctgctcaccataag
gttgaagaaattaataaagccttccgccgcggactgatgacagacgacgatcgctatatt
gcggtaactgcaacttggcgtgaagcaaaagaagagcttgaaaaacgcctaattgaaact
caggatcctaagaatccaatcgttatgatgatggactccggagcccgcgggaatatttcg
aacttctctcagcttgctggaatgcgcggacttatggcggcaccaaacggtcggattatg
gaacttcctattttgtcaaacttccgtgaaggcttgtctgttttggaaatgttcttctca
actcacggtgcccgtaaaggcatgaccgatacagcccttaagaccgcggactccggctat
ttgacccgccgtttggttgatgtcgctcaagatgtgattatccgtgaagacgactgcgga
acagaccgcggacttgatattacagctattactgatggcaaagaagtaacagaaacattg
gcagaacgtttagttggacgctataccaagaaatctgtcaaagatccaaaaacaggagag
cttattgttcctgctaatactctgctgacagaagatatggctgacgcgattgccaaagcc
ggtgttgaaaaggtaacgattcgttcggtctttacctgcaatacccgccatggtgtctgc
cgccattgttatggtattaatctggcgacaggcgatgctgtcgaggttggtgaagctgtc
ggaactgttgcagcacaatctatcggcgagcccggaacccagcttactatgcggaccttc
cacacgggcggtgtagcatcaaatactgatattactcaaggtctgccacggattcaggaa
atttttgaagcccgtaatcctaaaggtgaagccgtgattaccgaggtcaaaggtcaaatt
gctgatattgaagaagatgcggcgacccggaccaaaaaagtatttgttcagggagaaact
ggtacaggagaatacgtagtaccatttactgcccgaatgaaagtggaaatcggagatact
gttcatcgcggagatgccctgacagaaggttctattcagcctaagcgtttgcttgaggta
cgagataccttatctgttgaaacttaccttcttgctgaggtacaaaaagtttaccgcagc
caaggggtagaaattggggataagcacattgaagtgatggttaggcaaatgctccgcaag
gttcgtatcatggatccgggagatactgatctactgccaggcaccttgatggacattgct
gattttacagatgctaacagagaaattgtcatcacaggcggtgtccctgcgacaagccgt
cctgtcctgatgggaattacaaaggcctctcttgagacaaattccttcttatcagcagct
tccttccaagaaacaacccgagttctgactgacgctgcgattcgcgggaagcaggatcat
ttgctgggtcttaaagaaaatgttattatcgggaaaattattcctgccggaacaggtatg
gctcgctatcggaatattgagccgcaggctgttaatgagattgaaattatggacgatgta
gaaactatcgacatagttgaaacagaaactctggcagcagaataa
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integrated database retrieval system
