Sphingomonas paucimobilis: DRN02_001060
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Entry
DRN02_001060 CDS
T06034
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spau
Sphingomonas paucimobilis
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spau02000
]
DRN02_001060
Transporters [BR:
spau02000
]
Other transporters
Pores ion channels [TC:
1
]
DRN02_001060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QBE90791
LinkDB
All DBs
Position
complement(248995..251121)
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AA seq
708 aa
AA seq
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MLKPVLLSGLSAAALAIPLSAAAAQTAPQPTNRGREIVVTAPVLQSEADVLSGTSIVTGD
ELQRSIRPTIGETLARQPGVSATSFGPNASRPVLRGFQGERIRVLTDGIGSIDVSNTSVD
HAVVINPLLAERIEVLRGPSALLFGSSAVGGVVNVIDNRIPRTVPENGYRLSGIASYGSA
ANERSVAGATDVAVGKQFVVHADGSYLKTDDLKIGGYVLSRRARAEALASAGRAPNDPLD
FAGVANLRGRLPNTASETWTASVGAAFIADNGSLGVSYSHYDSLYGVPIRYSLEPGGEEP
EAPRLSLVQNRVDLRGEIETGGGFLDRIRLRAGMADYRHFELEEDGEVGTAFYNKGIEGR
LELVQAKRNGWQGASGVQFFNRDFDVQGDEAFLPRNNTAQVGLFTLQQLDRGAFKMEAGA
RYEHTTLTARTAVTDDRFFRGQRDFNAFSGSIGASYGFAPDWRAGLNLSRTERAPSAEEL
FANGPHAGTEAYELGNPDFKKEASWGIEATLHGHGEGYSFDASAYYNRFSNYIYDALVPQ
GPCVAAAAPSGRDVDLPCFQYAQADARYYGIEAEGSLRLATIGRYAINADLLGDYVNAQI
LGTGPAPRIPPLRLLGGLEAQSDTVNARVEVERSFKQTRVLGLETPTDGFTLVNASVQLK
PWGTLNPTTLTLSANNIFDVDARRHASVLKDFAPLAGRDLRATLSFKL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaagcccgtcctgctgtccggcctgtccgccgccgcccttgccatcccgttgagc
gccgccgccgcgcaaaccgcgccgcagccgaccaatcgtggccgcgagatcgtcgtgacc
gcgccggttctgcagtcggaggcggatgtgctgtcgggcacctcgatcgtcaccggcgac
gaactgcaacgctcgatccgcccgaccatcggcgagacgctggcgcgccagccgggcgtg
tcggccacgtccttcggtccgaacgcctcgcgtccggtcctgcgcggtttccagggcgaa
cgtatccgcgtgctgaccgacggcatcggctcgatcgacgtgtcgaacaccagcgtcgac
catgcggtggtcatcaacccgctgctcgccgaacgcatcgaggtgctacgcggcccctcg
gccctgctgttcggttcgtcggcggtgggcggcgtggtcaacgtcatcgacaaccgcatt
ccgcgcaccgtgccggagaatggctatcgcctgtcgggcatcgccagctatggctcggcc
gccaatgagcgctcggtggcgggcgcgaccgacgttgcggtgggcaagcagttcgtcgtc
catgccgatggctcctacctcaagaccgatgacctgaagatcggcggctatgtcctgtcg
cgtcgggcgcgggccgaggcgctggcctccgctggccgggcccccaatgatccgctcgat
ttcgcgggcgtcgcgaacctgcgcggtcgcctgcccaacaccgccagcgagacctggacg
gcgagcgtcggggctgcgttcatcgccgacaatggttcgcttggcgtctcgtacagccat
tatgacagcctgtacggcgtgccgatccgctattcgctcgagcccggtggcgaagagccg
gaagccccacgcctcagcctggtccagaaccgcgtcgatcttcgcggcgagatcgagacc
ggcggcggcttccttgaccgtatccgcctgcgcgccggcatggccgattatcgccatttc
gagctggaggaggatggcgaggtcggcaccgctttctacaacaagggcatcgaaggccgg
ctggaactggtccaggccaagcgcaatggctggcagggcgcgtcgggcgtgcagttcttc
aaccgcgactttgacgttcagggcgacgaggcgttcctgccgcgcaacaacacggcgcag
gtcggcctgttcacgttgcaacagcttgatcgcggcgcgttcaagatggaggccggcgcg
cggtacgaacataccacgctgaccgcacgcaccgccgtcaccgatgaccgcttcttccgc
gggcagcgggacttcaacgccttttcaggctcgatcggcgcgagctatggcttcgcgccc
gactggcgcgccggcctgaacctgtcgcgcaccgagcgcgcgccctcggccgaggagctg
ttcgccaacggcccccatgccgggaccgaggcctatgaactgggcaatccggacttcaag
aaggaagccagctggggcatcgaagcaacgctgcacgggcatggcgagggctatagcttc
gacgcctcggcctattacaaccgcttctccaattacatctatgacgcgctggtgccgcag
ggtccttgcgtcgccgccgcggccccctcgggtcgtgacgtcgacctgccctgcttccaa
tatgcgcaggcggacgcgcgctattacggcatcgaagcggaaggatcgctgcggctcgcc
accatcggccgctatgcgatcaacgccgacctgctgggcgattatgtcaacgcacagatt
ctcggcaccggtcccgcgccgcgcatcccgccgctccgtctgctcggcgggctggaggcc
cagtcggacactgtgaacgcacgggtcgaggtcgaacgcagcttcaagcagacccgcgtc
ctggggctggagacgccgaccgatggcttcacgctggtcaacgcctcggtgcaactcaag
ccctggggcacgctgaatccgacgacgcttaccctgtcggcgaacaatattttcgacgtc
gatgcgcgccgccatgccagcgtgctgaaggatttcgccccgctggcgggccgtgatctg
cgcgcgacgcttagcttcaagctctga
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