Sphingomonas paucimobilis: DRN02_002510
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Entry
DRN02_002510 CDS
T06034
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
spau
Sphingomonas paucimobilis
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spau03000
]
DRN02_002510
Transcription factors [BR:
spau03000
]
Prokaryotic type
Helix-turn-helix
Other families
DRN02_002510
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_23
HTH_29
HTH_30
AAA_5
HTH_Tnp_ISL3
HTH_50
HTH_1
AAA
Mg_chelatase
HTH_28
AAA_16
Sigma70_r4_2
HTH_17
TsaE
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
QBE91025
LinkDB
All DBs
Position
562460..564340
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AA seq
626 aa
AA seq
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MFSHGDHIREIERVALGRATNRDTHVIESWRRCLDRYRMDPAAAREAVILPAERLKEHRQ
QAEELITIARSGLDSLYRQVAGQAYVLLLADRQGVTVDFIGDPLFDGNLRKAGLYLGSKW
TEDMSGTCAVGSCLATGEALIIHQTDHFDTTHTPLSCTSAPIYDASGELSAVLDISLLSS
PSVKTSQNLALHLVTAAARRIELAHLMARTRHQWVLRFARSPDFIEVDPEAAIAIDDAGR
IAGMTHGGARVLARAVGGDWRAPQTLIGKPVSRFLDLDIDDLPDLTRGRATNERVVRARD
GDTLFAHAIEPKAVRRSVVSRPLPAPFRELGGNTPEMMDLQHKAAKLARAALPILIQGET
GTGKEHLARAIHDGSGVAGRFVAINCAAIPEALIESELFGYAAGAFTGAAPKGRKGLIEQ
ADGGTLFLDEIGDMPIALQSRLLRVLAEREVQPVGAAMPKPVRLRVISASHRSLPELVAQ
GTFREDLYYRLCAAVLRLPPLRERSDFDWLLARLVERHRLGDGAVEITPAARAALRGHEW
PGNIRELDNVIAVALAMADGDMIDLEDLPEGFGTPPQAVDGKDNAAVLRTTLAACDWNVS
EAARRMGVDRTTVHRQIRRFGIATRN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgcatggcgatcacattcgtgagattgaacgcgtcgcccttggccgggcgacc
aaccgggatacgcatgtcatcgagtcgtggcgtcgctgcctcgaccgatatcgcatggat
cccgccgcggcgcgcgaagccgtcatcctgccggccgaaaggctgaaggagcatcggcaa
caggccgaggaactcatcaccatcgcccgatcggggctcgactcgctataccgtcaggtt
gcgggccaagcctatgtcctgctgcttgccgatcggcagggggtgacggtcgatttcatc
ggcgacccgctgttcgacggcaatctgcgcaaggcggggctctatctcggctcgaaatgg
accgaggatatgagcgggacgtgcgcggtcggatcatgcctcgcgaccggcgaagcgctg
atcattcatcagaccgatcatttcgacacgacccatacgccgctatcctgcacctccgcg
ccgatctacgacgcgagtggggaattgtcggcggtactggacatctcgctgctgtcgtcg
ccttcggtgaagacgagccagaacctcgcgctgcatctggtgacggcggcggcgcggcgg
atcgaactcgcgcatctgatggcgcgcacgcggcatcaatgggtattgcgcttcgcccgc
tcgcccgacttcatcgaggtcgaccccgaggcggcgatcgcgatcgacgatgccgggcgg
atcgcgggaatgacgcatggcggcgcgcgcgtgctcgcgcgcgcggtcggcggcgactgg
cgcgctccgcaaaccctgatcggcaagccggtgtcgcgcttcctcgatctggatatcgac
gatctgcccgatctgacgcgggggcgcgcgacgaatgagcgggtcgtgcgcgcacgcgac
ggggatacgctgttcgcgcacgctatcgagccgaaagcggttcggcgcagtgtcgtctca
cgacccttgcctgcgccgttccgggaactcggcggcaacacgcccgagatgatggacctg
cagcataaggccgccaagctcgcccgcgccgcgctgcccatcctgatccagggtgagacc
gggaccggcaaggagcatctggcgcgcgccattcatgacggcagcggcgtcgccgggcgg
tttgtcgcgatcaactgtgcggcgatcccggaggcgttgatcgagagcgagttgttcggt
tatgccgcaggggcctttaccggcgcggcgccgaaggggcgcaagggcctgatcgagcag
gcggatggcggcaccttgttcctggacgaaatcggcgacatgccgatcgctttgcagagc
cggctgttgcgcgtccttgccgagcgggaggtccagccggtcggtgccgcaatgcccaag
ccggtacgcctccgcgtcatctcagcctcgcaccgctcgctacccgaactggtcgcgcaa
gggacgttccgcgaggatctctattaccgcctgtgtgcagcggtgctgcggctgccgccg
ctgcgggagcggagcgatttcgactggctgctggcgcggctcgtcgagcggcatcggctg
ggtgacggggcggtggagatcacaccggcggcgcgcgccgcgcttcggggacatgagtgg
cctggcaatatccgcgaactggacaatgtgatcgccgtggcgctcgccatggcggatggt
gatatgatcgaccttgaggacctgccggaggggttcgggacgccaccgcaggccgtggat
ggcaaggacaatgcggccgtgctgcgcacgacgctggcggcgtgcgactggaacgtgtcg
gaggcggcgcggcggatgggcgtggatcgtaccaccgtgcaccgccagatccgtcggttc
gggatcgccacccgcaactag
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