Sphingomonas paucimobilis: DRN02_003670
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Entry
DRN02_003670 CDS
T06034
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spau
Sphingomonas paucimobilis
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spau03009
]
DRN02_003670
Enzymes [BR:
spau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DRN02_003670
Ribosome biogenesis [BR:
spau03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DRN02_003670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PSD5
Motif
Other DBs
NCBI-ProteinID:
QBE91226
LinkDB
All DBs
Position
complement(801652..802848)
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AA seq
398 aa
AA seq
DB search
MSDIIIRVAARGDGVTENGRHAAFAAPGDTLSADGAVVPGPHHQTPPCGHFPRCGGCQLQ
HLDDESYAGFVTDRIASALDAQGLTAPLRPAHLSPPRSRRRATLHAETKGGRVLIGFSEE
KSHAIVDIVECHILAPELFALVAPLRGLLQRLGFKRRGDVHLTLADQGADILVTSFSPDG
LEAAEAIIGFCERHGVARFAVDDGMGPETRWEPEPVTITLGGVGVPLPPGAFLQATRDGE
AALVAAVTEAVGNPRTTADLFAGLGTFALALPGKVYAAEGARDAILSLKGAANACGRAVF
AEHRDLYRRPLTKAELDRFDAIVLDPPRAGARDQAEALASAAVGAVAYVSCNPSSFARDA
RMMVDQGWSLEWVQPVGQFRWSTHVELAARFVRQPSSG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatcattatccgcgtcgccgcgcgtggcgacggcgtgaccgaaaacgggcgt
catgccgcatttgccgcccccggcgacaccctgtccgccgacggcgccgtcgtgccgggc
ccgcaccatcagacgccgccctgcggtcatttcccgcgctgtggcggatgccagctccag
catctcgacgatgaaagctatgcgggcttcgtcaccgaccggatcgcctccgccctcgac
gcgcaagggctgacggcgccgctgcggccggcgcatctctcgccgccacgcagccgccgc
cgcgcgaccctccatgccgaaaccaagggcggccgcgtcctgatcggcttttcggaggag
aagagccacgccatcgtcgatatcgtcgagtgccatatcctggcccccgagctctttgcg
ctggtcgcgccgctgcgggggctgctccagcggctggggttcaagcggcgtggcgacgtc
catctgacgctggccgatcagggcgccgatattctggtcacgagcttttcgcccgatggc
ctggaggccgccgaggcgatcatcggtttctgcgagcgtcacggggtggcgcgtttcgcg
gtcgatgacggaatgggccccgagacccgttgggagcccgagccggtgacgatcaccctc
ggcggcgtcggcgtgcctttgccccccggcgctttcctgcaagcgacgcgtgacggtgaa
gccgcgctggtggcggccgtcaccgaagcggtcggcaatccccgcacgacggccgacctg
tttgccggtctcggcaccttcgcacttgccttgccgggcaaggtctatgccgccgagggt
gcgcgcgacgctatcctgtcgctgaagggggcggccaatgcttgcggacgtgcggttttc
gccgagcatcgcgacctttatcgccggccgctgaccaaggcggaactcgatcgctttgat
gcgatcgtgctcgatccgccgcgggccggcgcacgcgatcaggccgaggcgctggccagc
gcggccgtcggtgcggtggcctatgtgtcgtgcaacccgtcgagcttcgcgcgcgacgcg
cggatgatggtcgatcagggttggtcgctcgaatgggtgcaaccggtggggcagttccgc
tggtcgacccatgtcgaactggcggcgcgcttcgtgcgtcagccttcgtcggggtaa
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