Sphingomonas paucimobilis: DRN02_003955
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Entry
DRN02_003955 CDS
T06034
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spau
Sphingomonas paucimobilis
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spau02000
]
DRN02_003955
Transporters [BR:
spau02000
]
Other transporters
Pores ion channels [TC:
1
]
DRN02_003955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QBE91272
LinkDB
All DBs
Position
865771..868602
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AA seq
943 aa
AA seq
DB search
MIQAAAIKKRHRMRVVGGLSSALVALIAATPALAQTQTPPADQTATLPSQTEADGTSADI
VVTGIRRSIESAAAVKRDAAGILDAISSEDLGKFPDANVAESLQRIPGVAIDRSNGEGQS
VSVRGLGPAFNTVLFNGRSFASDNYNRAFSFDLIPAELISGAQVYKSSQASLQGGGIGAT
INVQTPRPLALKEFKGVFTGKALYEGNSKKVTPQLFGLLSDTFADGRLGLLASISYQKRI
ASIRAINTDGYIPGTSVGPNSAPLYTNVYAPRNQDVNETRDARTRLGATLVAQYAPTDEL
TFTVDGLYNRFKSDTTTRGLGSWFEPTSYTAAGIDSNRTVTSLTTNGNADFIASGGVRET
TTYEAGFNAEWRPTETVRMVFDATYSQAKNAGGGKSYFTVIGVPTQYSFNAAEGNGIPST
SGYAGGVLTNPALGRTHIAGRTGNDVTEKVQEYRWNTEWKPGWDIVSALRFGVTGTSRDK
RNVPFSSDPNIGCLYCGYPTLADPSLLSPFTIGALGQKGGSVPTTFLTYDPQAYFNFLTS
AAATAALDRARGQPVGTTAAIFARTNGYAVTEQPSARVREKVFASYADVDLEGTVAGLPW
FINVGGRYEYTELVSAGQQLQLTDLLPVPGDPTTYTGVFANNRAAVSVNRRSSYSNFLPN
LNAKLNFTPKLQARFAAYKTLTRPAIGDLAPSLDIGTLRPATLTASGGNPELKPYRATNF
DLSLEWYPTPTTTLSAAVFHKTVNDFIVQTFGEELFTIANAGNLPVGGLIVGPNTAKFSV
RRPRNAESLKIKGLELNVVHTFDWLPGVLSGFGVQANATFVTTNREFDVSQVGQSFAAEG
IGNSQNATLFYEKFGVSARIAYNRRERFLQQLAGGPGNEPVFVRDYGQFDGSVAVNVTPF
AQVFVEGTNLFNAKYFATGRFDNQLLRYQNFGPRYDAGVRFSF
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagctgctgcaatcaaaaagcgtcatcgcatgcgtgtcgtgggtggcctgtcc
agtgcacttgtcgcacttatcgccgccacaccggccttggcgcagacccagacaccgccc
gccgatcagactgctactctccccagccagaccgaggcggacggcacctccgccgatatc
gtcgtcaccggcatccgccgcagcatcgaatcggccgccgccgtaaagcgcgatgcggcc
ggcattctcgacgccatctcgtccgaggatctcgggaaatttcccgacgccaatgtcgcc
gagtcgctgcaacgcattcccggcgtcgcgatcgaccgcagcaatggcgaaggccagtcg
gtcagcgtgcgcggcctcggccccgccttcaacaccgtgttgttcaacggccgcagcttc
gcgtcggacaattacaatcgcgctttctccttcgacctgatcccggccgaactgatcagc
ggcgcgcaggtctataagagctcgcaggcctcgcttcagggcggcggtatcggcgcgacg
atcaacgtccagacgccgcgtccgctggcgctcaaggagttcaagggcgtcttcaccggc
aaggcgctgtatgagggcaacagcaagaaggtgacgccgcagctcttcgggctgctcagc
gacaccttcgccgatggcaggctggggttgctcgcctcgatctcgtaccagaagcgcatc
gcctcgatccgtgcgatcaacaccgacggctatattcccggcacctcggtcggcccgaac
agcgcgccgctctataccaatgtctatgccccgcgaaaccaggacgtgaacgagacgcgc
gacgcgcggacccgcctgggcgccacgctagtcgcgcaatatgccccgaccgacgagctg
accttcactgtcgacggcctgtacaaccggttcaaaagcgacacgacgacgcggggtttg
ggcagttggttcgagccgaccagctacaccgccgccgggatcgattccaaccgcaccgtc
acctcgctgaccaccaatggcaatgccgacttcatcgcctcgggcggggtgcgcgagacg
acgacctatgaggccgggttcaatgccgaatggcgcccgaccgagacggtgcgcatggtc
tttgacgccacctattcgcaggccaagaatgcgggcggcggcaaatcctatttcaccgtt
atcggcgtgccgacccaatattcgttcaacgcggccgaaggaaacggcattccctccacc
tcgggctatgccggcggcgtgctgaccaacccggcgctgggtcgtacccatatcgccggg
cgtaccggcaatgacgtgaccgagaaggtccaggaatatcgctggaacaccgaatggaaa
ccgggctgggacatcgtctcggcgctccgcttcggcgtgaccggcacctcgcgcgacaag
cgcaacgtccccttctcgtccgatcctaatatcggctgcctctattgcggctatccgacg
ctcgccgatccgtcgctgctctcgcccttcaccatcggagcactgggacagaagggcggc
agcgtgccgaccaccttcctgacctatgatccccaggcctatttcaacttcctgaccagc
gcggcggcgacggccgcgctcgatcgtgcccggggccagccagtgggcacgacggcggcg
atcttcgcgcgcaccaatggctatgcggtgaccgagcaaccctcggcccgcgtgcgcgaa
aaggtgttcgccagctatgcggatgtcgatctggaggggacggtcgccgggctcccctgg
ttcatcaatgtcggcgggcggtatgaatataccgaactagtctccgccggacagcaattg
cagttgaccgacctgctgccggtgccaggcgatccgacgacctataccggcgtcttcgcc
aacaaccgggcggcggtatcggtcaaccggcgttcttcctacagcaacttcctgcccaac
ctgaacgccaagctgaacttcacgcccaagctccaggcgcgctttgcggcgtacaagacg
ctgacgcggccagcgatcggcgacttggcgcccagcctggacatcgggacgctgcgcccc
gccacgctgaccgccagcggcggcaatcccgagctgaagccctatcgcgcgaccaatttc
gacctgtcgctcgaatggtatccgacgccgaccacgaccctgtcggcggcggtgttccat
aagacggtcaacgacttcatcgtccagacctttggcgaggaattgttcaccatcgccaat
gccggcaacctgccggtcggcgggctgatcgtcggccccaacaccgccaagttcagcgtc
cgacgcccgcgcaacgcggagtcgctgaagatcaaggggctcgaactgaacgtggtgcat
acgttcgactggctgccgggcgtgctgagcggtttcggtgtgcaggccaatgcgaccttc
gtgaccaccaaccgcgaattcgacgtgagccaggtcggccagtccttcgcggcagagggt
atcggcaattcgcagaacgccaccctgttctacgaaaaattcggcgtgtcggcgcgtatc
gcctataaccggcgcgaacgcttccttcagcagctcgcgggcggtccgggtaacgagccg
gtgttcgtgcgcgattacggccagttcgacggcagcgtggcggtgaacgtcacacccttt
gcccaggtcttcgtcgaggggaccaacctgttcaacgcgaaatatttcgcgaccgggcgc
ttcgacaaccaattgctacgctaccagaatttcgggcctcgctatgacgcgggcgtccgc
ttctccttttaa
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