Sphingomonas paucimobilis: DRN02_004570
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Entry
DRN02_004570 CDS
T06034
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spau
Sphingomonas paucimobilis
Pathway
spau00260
Glycine, serine and threonine metabolism
spau00460
Cyanoamino acid metabolism
spau00630
Glyoxylate and dicarboxylate metabolism
spau00670
One carbon pool by folate
spau00680
Methane metabolism
spau01100
Metabolic pathways
spau01110
Biosynthesis of secondary metabolites
spau01120
Microbial metabolism in diverse environments
spau01200
Carbon metabolism
spau01230
Biosynthesis of amino acids
spau01240
Biosynthesis of cofactors
spau04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DRN02_004570
09102 Energy metabolism
00680 Methane metabolism
DRN02_004570
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DRN02_004570
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DRN02_004570
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DRN02_004570
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DRN02_004570
Enzymes [BR:
spau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DRN02_004570
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QBE91381
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Position
complement(984332..985636)
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AA seq
434 aa
AA seq
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MEASTLRPPSQSADRGGISAADLASVDKVVEDAIALERDRQCHSIELIASENFVSPAVLQ
AQGSVLTNKYAEGYPHRRYYGGCAHVDVVEDLAIERVKQLFGSNYANVQPHSGSQANQSV
YLALLAPGDTILGLDLKAGGHLTHGATVNMSGRWFNAVSYGVDPATHRIDMDDVARLARE
HRPRLIIAGGSAYPRTFDFARFRAIADEVGAILMVDMAHFAGLVAGGAFPSPIPFADVVT
STTHKTLRGPRGGFVLTNDADIAKKINSATFPGLQGGPLMHIIAAKAVAFGEALQPSFKA
YANAVVENCRVLAQTLTDGGLAITSGGTDCHLAVVDLRPLGVTGNVAEKALESVGITLNK
NAIPNDPEKPMVTSGIRVGSAAGTSRGFGADEYRQIGGMLLDTLRAVREDRLDAARAEIN
GQVRALVARFPLPY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatcgacactgcgacccccttcacagtcggccgatcgcggcggcatcagcgcg
gccgatcttgcgagcgtcgacaaggtggtcgaggacgccattgcgctcgaacgcgaccgg
caatgccattcgatcgagctgatcgcatcggagaatttcgtcagccccgcggtccttcag
gcgcaaggctcggtgctcaccaacaaatatgccgaaggctatccacaccgccgttattat
ggcggctgcgcgcacgtcgatgtcgtcgaggatctcgcgatcgaacgggtcaagcagctc
ttcggcagcaactatgccaacgtccagccccattcggggagccaggccaatcagtcggtc
tatctcgcactgctcgcgccaggggacacgatccttggtctcgaccttaaggccggcggg
cacctgacccacggggcgacggtcaatatgtcgggccgctggttcaatgcggtcagctac
ggcgtcgatcctgcaacccatcgcatcgacatggatgacgtcgcccggctcgcccgcgag
catcgcccccggctcatcatcgccggcggctccgcctatccgcgcaccttcgatttcgct
cgcttccgcgcgattgcggatgaagtgggcgcgatccttatggtcgacatggcgcatttc
gcagggctggtcgccggcggcgccttcccgtcgcccattccctttgccgatgttgtgaca
tcgacgacgcacaagacattacgtgggccgcgcggcgggttcgtgctcaccaacgacgcc
gatatcgcgaaaaagatcaattccgcgaccttccccggcctccagggcggtccgctgatg
cacatcatcgccgccaaggcggtggcgtttggcgaggcgctccaaccgtctttcaaggcc
tatgcgaatgccgtggtcgagaactgccgtgtgctcgcgcagacgctcaccgatggcgga
ctggccatcacgtcgggcggcaccgactgtcaccttgcggtggtcgatcttcggccactc
ggtgtcaccggcaatgttgccgaaaaggcgctggaatcggtcggcatcacgctcaacaag
aacgccatccccaatgacccggaaaagccgatggtgacgtcgggcattcgtgtcggcagc
gcggcgggaacctcgcgcgggttcggcgctgacgaatatcgccagatcggcggtatgctg
ctcgatacactgcgtgcggttcgcgaggacaggctggatgccgcccgcgcggaaatcaac
ggccaggtgcgtgcgctggttgcacgttttccgctgccttattga
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