KEGG   Sphingomonas paucimobilis: DRN02_006360
Entry
DRN02_006360      CDS       T06034                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
spau  Sphingomonas paucimobilis
Brite
KEGG Orthology (KO) [BR:spau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spau03016]
    DRN02_006360
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:spau02048]
    DRN02_006360
Transfer RNA biogenesis [BR:spau03016]
 Prokaryotic type
  tRNA degradation factors
   DRN02_006360
Prokaryotic defense system [BR:spau02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    DRN02_006360
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: QBE91680
LinkDB
Position
complement(1374984..1375385)
AA seq 133 aa
MGSCSVVIEPRYLLDSNICIYVLRDADGRAAQRLATCEPGSAVASAITYAEIMRGLERHG
EEAIAAFDRFFDRVPILPFDRHAASAYATIPFRRGRFDRLIGAHALATGLTLVTNNEADF
ADIPGLTIENWTL
NT seq 402 nt   +upstreamnt  +downstreamnt
atgggaagctgctcggtcgtgattgagccgcgctatttgctcgactccaatatctgcatc
tatgtgctacgcgacgcggatggccgcgcggcccagaggctggcgacatgcgagccgggc
agcgcggtggcctccgcaatcacctatgccgaaatcatgcgggggctggaacggcatggt
gaagaggcgattgcggcctttgatcgctttttcgatcgtgtgccgatattgccgttcgac
cggcatgccgcatcggcctatgcgacgatcccgttccggcgcgggcggttcgatcgcctg
atcggcgcccatgcgctggcgacgggcctgacgctggtgaccaacaacgaagccgacttc
gccgacatccccggcctgaccatcgagaactggacgctgtga

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