Sphingomonas paucimobilis: DRN02_006680
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Entry
DRN02_006680 CDS
T06034
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spau
Sphingomonas paucimobilis
Pathway
spau00300
Lysine biosynthesis
spau00470
D-Amino acid metabolism
spau01100
Metabolic pathways
spau01110
Biosynthesis of secondary metabolites
spau01120
Microbial metabolism in diverse environments
spau01230
Biosynthesis of amino acids
Module
spau_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DRN02_006680
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DRN02_006680
Enzymes [BR:
spau01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DRN02_006680
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QBE91735
LinkDB
All DBs
Position
complement(1434373..1435587)
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AA seq
404 aa
AA seq
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MKPMGPLPPEFATQHGALMIGGRSAEDWMQGRDGPLFVYDPAIVAARVARFRAAFPTIDL
HYAIKANPFPPLLAAMAGLVDGFDVASSGELAKVVELGKPVSFAGPGKRDAELAAAIDAG
ITLNLESEGEATRGLAIAERLGRTPRLAVRVNPDVELRGSGMKMGGRPSPFGIDAARVPA
LVRTIVASGAEWRGFHIYAGSQALDPQAIIDTQAATIALAARLAEEAGHTPPLVNLGGGF
GVPYFAGDQSLDIEQVGTALTQALEARPDILRDTRFAIELGRWLVAEAGVYMAHVVDIKD
SGGERFAILDGGLNHQLAASGNFGTVVRRNYPLALAHAMGAEAIQTVSVVGPLCTPLDRL
GDRVALPAVHVGDIVAIFLAGAYGASASPSAFLGHGPADEILAR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatgggcccccttccacccgaattcgcgacgcagcacggcgcgctgatgatc
ggcgggcgtagcgcggaggactggatgcaggggcgcgacggcccgctattcgtctatgac
cccgcgatcgtggcggcgcgggtggcgcggttccgcgcggccttccccacgatcgacctt
cattatgcgatcaaggccaacccctttccgccgctgctcgccgcgatggcaggtctcgtc
gatggcttcgacgtcgcctcatccggggaactggccaaggttgtggaactcggcaagccg
gtcagtttcgccggcccgggcaagcgcgatgccgaactcgcggccgcgatcgatgccggg
atcacgctcaacctcgagtcggaaggcgaggcgacccgcgggctcgccatcgccgagcgg
ctagggcgcacgccgcgcctggccgtgcgggtcaatccggatgtcgagttgcgcggatcg
ggcatgaagatgggcggccggccgtcccccttcggtatcgatgccgcgcgtgtgcccgcg
ctcgtccgcacgatcgtcgcgagcggcgcggaatggcgcggcttccatatttatgccggc
agccaggcgctcgatccgcaggcgatcatcgacacgcaggcggccacgatcgccctcgcc
gcgcgtctggccgaggaagcggggcacacgccgccgctggtcaatctgggcggtggattc
ggtgtgccctattttgcgggcgaccaatcgctggatatcgagcaggtcggcaccgcgctg
acccaggcgttggaggcgcggccggacatcttgcgcgacacgcgcttcgcgatcgaactc
ggccgttggctggtggcggaggcaggcgtttatatggcgcatgtcgtcgacatcaaggac
agcggcggcgagcggttcgcgatcctcgatggcgggctgaaccaccaactggcggccagc
ggcaatttcggcaccgtcgtccggcgcaactatccgctggcactcgcccatgcgatgggg
gcggaggcaatccagaccgtgtcggtcgtgggtccgctctgcaccccgctcgaccggctg
ggcgaccgggtggcgctgcccgctgtccatgtcggggacatcgtcgcgatctttctggcc
ggggcctatggagccagtgccagcccttcggcgtttctgggtcacggcccggccgatgag
atattggcccgatga
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