Sphingomonas paucimobilis: DRN02_008495
Help
Entry
DRN02_008495 CDS
T06034
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spau
Sphingomonas paucimobilis
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spau03032
]
DRN02_008495
03400 DNA repair and recombination proteins [BR:
spau03400
]
DRN02_008495
Enzymes [BR:
spau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DRN02_008495
DNA replication proteins [BR:
spau03032
]
Prokaryotic type
DNA Topoisomerases
DRN02_008495
DNA repair and recombination proteins [BR:
spau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DRN02_008495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
THDPS_N_2
Motif
Other DBs
NCBI-ProteinID:
QBE92053
LinkDB
All DBs
Position
1811210..1812211
Genome browser
AA seq
333 aa
AA seq
DB search
MASRLIYCDDTKPGITRSKIRGKWAYWSPEGERITDRDEIDRLNRIGLPPAYKDAWFCPR
ANGHIQAVGWDEKGRKQYRYHADFREAQDAAKYERCAAFGHALPALRKRVEADLKKRGLC
KERAVAAVVRLLDNGHLRVGNEAYAATNKSFGATTLRKRHGQVKGTTLRLRYRGKSGKMR
DLTLTDRSLASFVKRCQDLDEQHLFAWVDEDGEANPVSSSDVNAYIREATGCDFTAKHFR
TWAASVAAFEALALAEADLSLKAMLEPVVEKLGNTPAIARKSYVHPSLIALVKDGQAAFR
KALRLPRARAGLSRVECGLIAFLEAGTPATQAA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccgattaatctattgcgatgacacgaaacccggcatcacccggagcaagatc
cgcggcaaatgggcctattggagccccgagggcgagcgcattaccgaccgggatgaaatc
gaccggctgaaccgcatcggcctgccccccgcgtacaaggatgcctggttctgtccccgc
gccaatggccatatccaggcggtcggctgggacgagaagggccgcaagcaatatcgctat
cacgccgatttccgcgaggcgcaggacgccgccaaatatgagcgctgcgccgcgttcggc
catgccctccccgccctgcgcaagcgcgtcgaagccgatctgaagaagcgcggcctgtgc
aaggagcgcgcggtggccgccgtcgtccggctgctcgacaatgggcatctgcgggtcggt
aacgaggcctatgccgcgaccaataagagtttcggcgcgacgacactgcgcaagcgccac
ggccaggtcaagggtacgacgctgcggctgcgctatcgcggcaagtcgggcaagatgcgc
gacctgacgctgaccgaccgttcgctcgccagcttcgtcaagcggtgccaggatctggac
gaacagcatctcttcgcctgggtcgatgaggacggtgaggcgaaccccgtctcctcctcc
gatgtcaacgcctatatccgcgaggcgacgggttgcgacttcaccgccaagcatttccgc
acctgggccgccagcgtcgccgcgttcgaggccctggcgctggccgaagccgacctcagc
ctgaaggcgatgctggaacccgtggtcgaaaagctgggcaacacgcccgccatcgcccgc
aaatcctatgtccacccctcgctgatcgcgctcgtcaaggacgggcaagccgcgttccgc
aaagcgcttcgcctaccccgtgcccgcgccgggctgagccgcgtcgaatgcgggctgatc
gcgtttctcgaagccggaaccccggcgacccaggcggcctga
DBGET
integrated database retrieval system
