Sphingomonas paucimobilis: DRN02_008990
Help
Entry
DRN02_008990 CDS
T06034
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spau
Sphingomonas paucimobilis
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DRN02_008990 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spau03019
]
DRN02_008990 (rnc)
03009 Ribosome biogenesis [BR:
spau03009
]
DRN02_008990 (rnc)
03036 Chromosome and associated proteins [BR:
spau03036
]
DRN02_008990 (rnc)
Enzymes [BR:
spau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DRN02_008990 (rnc)
Messenger RNA biogenesis [BR:
spau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DRN02_008990 (rnc)
Ribosome biogenesis [BR:
spau03009
]
Eukaryotic type
90S particles
RNase
DRN02_008990 (rnc)
Prokaryotic type
rRNA processing factors
DRN02_008990 (rnc)
Chromosome and associated proteins [BR:
spau03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DRN02_008990 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QBE94006
LinkDB
All DBs
Position
complement(1908416..1909123)
Genome browser
AA seq
235 aa
AA seq
DB search
MGIRRALEPDRRRVLSSVDSWLTQIFGRAPQDSAPFHRALTHGSQAAENYERLEFLGDRV
LGLIMAEWLWEQFPNEPEGQLSRRLNSLVTGPVCADVARDLGVRDHLRLGKQARDDGASD
SDNVLGDVMEALIGAWYREAGLDAARAFVRKAWGDRVHSQGKAPQHPKSALQEWAAAHNR
KAPEYEVTDRSGPHHAPRFTVTVRIGRTAEASASGANKQEAETAAAKALLAKLKA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgggtatccgccgcgcgctggaaccggatcggagaagggttttgagttctgtcgattcc
tggctgacccagattttcggccgtgccccccaggatagcgcaccctttcaccgcgcgctg
acccatggcagccaggcggcggagaattatgagcggctagagtttctgggtgaccgggtg
ctgggcctcatcatggccgaatggctgtgggaacagtttccgaatgaacctgaagggcaa
ttatcgcgccggctcaattcgctggtgacgggcccggtgtgcgccgatgtcgcgcgcgac
ctgggcgtgcgcgatcatctgcggttgggcaagcaggcgcgggacgatggtgcgtcggat
agcgacaatgtgctgggcgatgtgatggaggcgctgatcggcgcctggtatcgggaagcg
gggctggatgcggcgcgtgcctttgtccgcaaggcctggggtgatcgggtgcactcgcag
ggcaaggcgccgcagcatcctaaatcggcgctgcaggaatgggccgccgcgcataatcgc
aaggcgccggaatatgaggtgaccgaccgctcgggcccgcatcacgcgccgcgcttcacc
gtcacggtgcggatcgggcggaccgccgaggcgagcgcgtcgggggcgaacaagcaggag
gccgagacggccgccgccaaggcgttgctggcgaagttaaaggcgtaa
DBGET
integrated database retrieval system