Sphingomonas paucimobilis: DRN02_009255
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Entry
DRN02_009255 CDS
T06034
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
spau
Sphingomonas paucimobilis
Pathway
spau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DRN02_009255 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spau03400
]
DRN02_009255 (uvrA)
DNA repair and recombination proteins [BR:
spau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DRN02_009255 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DRN02_009255 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
nSTAND1
DnaJ_CXXCXGXG
AAA_25
AAA_23
DUF4350
Permuted_GreAB-C
CA109-like
Motif
Other DBs
NCBI-ProteinID:
QBE92193
LinkDB
All DBs
Position
complement(1949434..1952334)
Genome browser
AA seq
966 aa
AA seq
DB search
MLTKISVRGAREHNLKDVDIDIPRDTLTVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLEMMQKPDVDHIEGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGIPY
SPATGEPIAAQTVSQMVDRVMTLPEGTRLYLLAPVVRGRKGEYRKEMAEWQKAGFTRVRI
DGQLYEIDEAPALDKKFKHDIEVVVDRLVVREDIATRLADSFETALKLADGLAYVDPADP
VEPATPKSAVLGNNAPDGRIVFSEKFACPISGFTISEIEPRLFSFNAPQGACPACDGLGE
KLIFDEDLVVPNHELSIKKGAVVPWAKSNPPSPYYMQVLGSLAREFGFSLETPWKDLDEN
VRDAILYGTKGKAVTLTFVDGKKSYDVKKPFEGVIGNLNRRMLQTESAWMREELSNYQSS
QPCEVCHGARLKPEALAVKIAMQDISHATRLSVVDALAFFNGLPEHLTDQQRAIAQPILK
EIVERLGFLNNVGLDYLNLDRTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQ
RDNDMLLATLRRLRDLGNTVLVVEHDEDAIRTADYVIDMGPGAGVHGGQIVAHGTLKQLL
KSKTSVTADYLNGTREIAVPAKRRKGSGKKLTVHKATANNLQGVTASIPLGTFTCITGVS
GSGKSSFTIDTLYAAAARTLNGARILAGKHEKISGLEHLDKVIDIDQSPIGRTPRSNPAT
YTGAFTQIRDWFAGLPEAQARGYKPGRFSFNVKGGRCEACQGDGVLKIEMHFLPDVYVTC
DVCHGARYNRETLEVKFKGHSIADVLDMTVEDAAEFFQAVPPIRDKMAMLVEVGLGYVKV
GQQATTLSGGEAQRVKLAKELSRRATGNTLYILDEPTTGLHFEDVRKLLEVLHALVEQGN
TVVVIEHNLDVIKTADWIVDLGPEGGVKGGEIVAVGTPEVVAAEPRSFTGKYLKPLLDKG
QAQAVE
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagatttccgtccgcggcgcgcgcgagcataatctcaaggatgtcgatatc
gacattccccgtgacacgctgacggtgatcaccggcctgtcgggctcgggcaagtcttcg
ctggcgttcgacaccatctatgccgaggggcagcggcgctatgtcgagtcgctgtcggcc
tatgcgcgccagttcctggagatgatgcagaagccggacgtcgaccatatcgagggtctg
tcgcccgccatctcgatcgagcagaagacgaccagccgtaatccgcgctcgaccgtcgcg
accgtcaccgagatctacgactatatgcgcctgctctgggcgcgggtcggcatcccttac
tcgcccgccaccggagagccgatcgcggcgcagacggtcagccagatggtcgaccgggtg
atgaccttgcctgagggcacgcgcctctatctgctcgcccccgtcgtgcgcggccgcaag
ggcgagtatcgcaaggaaatggccgagtggcagaaggcgggctttacccgcgtccgcatc
gacggccagctttatgagatcgacgaagcccccgcgctcgacaagaagttcaagcatgac
atcgaggtggtggtcgatcgtctggtcgtacgcgaggacatcgcgacgcgcctggccgac
agtttcgagaccgctttgaagctcgcggatggcctggcctatgtcgaccccgccgatccg
gtcgaacctgccacccccaagtccgcagtgctgggcaacaacgcgcccgacggccgcatc
gtcttttcggaaaaattcgcctgcccgatcagtggcttcaccatctccgagatcgagccg
cgcctcttctcgttcaacgcgccgcagggggcctgcccggcctgtgacggcctgggcgag
aagctgatttttgacgaggacctggtcgtccccaatcacgagctgtcgatcaagaagggc
gcggtggtgccctgggccaagtccaacccgcccagcccctattatatgcaggtgctgggt
agtcttgcgcgcgagttcggcttctcgctcgagacgccgtggaaggacctggacgagaat
gttcgtgacgcgatcctgtacgggacgaagggcaaggcggtcacgctgaccttcgtcgac
ggcaagaagtcctatgacgtcaagaagccgttcgagggcgtgatcggtaatctcaaccgc
cggatgctccagaccgagagtgcctggatgcgcgaggaactgtctaactatcagtcgtcg
cagccctgcgaagtctgccacggcgcgcggttgaagcccgaggcgctggcggtgaagatc
gcgatgcaggacatctcacacgcgacccgcctgtcggtggtcgatgcgctggccttcttc
aacggcctgccggagcatctgaccgaccagcagcgcgcgatcgcgcagccgatcctcaag
gagatcgtggagcgcttgggcttcctcaacaatgtcgggctcgattacctcaatctcgat
cggaccagcggcacgctgtcgggcggtgagagccagcggattcgcctcgcgtcgcagatc
ggctcggggctgtcgggtgtgctttatgtgctcgacgagccgtcgatcgggcttcaccag
cgcgacaacgacatgctgctcgcgacgctgcggcggttgcgcgatctgggcaataccgtc
ctggtcgttgagcatgacgaggatgcgatccgtaccgccgactatgtcatcgacatgggg
ccgggcgcgggcgtgcatggcgggcagatcgtcgcgcacggcacgctcaagcagttgctc
aagtccaagaccagcgtcaccgccgactatctgaatggcacgcgcgagatcgcggtcccg
gccaagcgccgcaagggttcgggcaagaagctgaccgtgcacaaggcgaccgccaacaac
ctgcagggtgtgacggcgagcattccgctcggcaccttcacctgcatcaccggcgtgtcg
ggatcgggcaagtcgagtttcaccatcgacaccctctatgccgccgccgcgcgcacgctg
aacggcgcccgcatattggcgggcaagcatgagaagatcagcgggctcgaacatctcgac
aaggtgatcgacatcgaccagtcgccgatcggccgcacgccgcgatcgaacccggcgacc
tataccggcgcgttcacccagatccgcgactggttcgcggggctgcccgaggcgcaggcg
cgtggctacaagcccggacgtttctcgttcaacgtcaagggcggccggtgcgaggcgtgc
caaggcgacggcgtgctcaagatcgagatgcacttcctgccggatgtctatgtgacctgc
gacgtgtgccacggcgcgcgctacaatcgcgagacgctggaggtgaagttcaagggccat
tcgatcgccgatgtgctcgacatgaccgtcgaggacgccgccgagttcttccaggcggtg
ccgccgatccgcgacaagatggcgatgctggtcgaggtcggcttgggctacgtcaaggtc
ggtcagcaagcgacgaccctgtcgggcggcgaggcgcagcgggtcaagctggccaaggaa
ttatcgcgccgcgcgacgggcaacacgctctacatcctcgacgagccgaccacggggctg
catttcgaggatgtgcggaaattgctcgaagtactccacgcgctggtcgaacagggcaat
acggtggtggtgatcgagcataatctcgacgtcatcaagactgccgactggatcgtcgac
cttggccccgaaggcggcgtaaaggggggcgagatcgtcgccgtcggcacgcccgaagtc
gtcgcagccgaaccgcgcagctttacgggcaagtatctgaagcccctgctcgataagggg
caggcgcaggcggtggagtaa
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