Sphingomonas paucimobilis: DRN02_011370
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Entry
DRN02_011370 CDS
T06034
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spau
Sphingomonas paucimobilis
Pathway
spau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DRN02_011370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spau03400
]
DRN02_011370
Enzymes [BR:
spau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DRN02_011370
DNA repair and recombination proteins [BR:
spau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DRN02_011370
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBE94065
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All DBs
Position
2430887..2431558
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AA seq
223 aa
AA seq
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MPDASFPAIPAPLAPIQPPRDCPLCPRLVEVRHAVAAEYPTWWNAPVYPFGDGEAWLAVV
GLAPGKHGAHRTGRPFTGDGAGPLLYGTLAKFGLAEGQFDARIDDGLTLTGAVILNAVKC
LPPENKPTPDEIRTCRSFLEQELAALPRLKVVVALGQIAHQSVVKALGGRLPKARFAHLA
EHRMPGGPVVLDSYHCSRYNQNTGRLTPEMFEAVFARAVALRG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgcatcctttcccgccatcccggcacccctcgccccgatccagccaccgcgc
gactgtccgctctgcccccgactggtcgaggtccgccatgcggtcgcggcggaatatccc
acttggtggaacgcccccgtttatccattcggcgatggcgaagcctggctggcggtggtc
ggccttgcgcccggcaagcatggcgcgcatcgcacgggccgaccctttaccggcgatggc
gcggggccgctgctctatggcacgctcgccaagttcggactggccgaggggcagtttgat
gcgcggatcgatgatggcctgacgctgaccggcgcggtgatcctgaacgcggtcaaatgc
ctgccgccggagaacaagccgacgcccgacgaaatccgcacctgtcgttcgtttctggaa
caagagctggcggcgctgccccggttgaaggtggtcgtcgcgctgggccagatcgcgcac
cagtcggtggtcaaggcgctgggcggccgcctgcccaaggcacggttcgcgcatctcgcc
gaacaccggatgccgggcggcccggtggtgctcgatagctatcactgctcgcgctacaac
cagaataccggccgcctgacgcccgagatgttcgaggcggtgtttgcgcgggccgtggca
ctgcggggatga
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