KEGG   Sphingomonas paucimobilis: DRN02_012225
Entry
DRN02_012225      CDS       T06034                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
spau  Sphingomonas paucimobilis
Brite
KEGG Orthology (KO) [BR:spau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spau03400]
    DRN02_012225
Enzymes [BR:spau01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DRN02_012225
    5.6.2.6  RNA 3'-5' helicase
     DRN02_012225
DNA repair and recombination proteins [BR:spau03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DRN02_012225
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 TRH
Other DBs
NCBI-ProteinID: QBE92698
LinkDB
Position
2592802..2595213
AA seq 803 aa
MLPGSLPSALTDWFAAKGWQPRTHQLAMLEEARAGRHALLVATTGAGKTLAGFLPTLTEL
IEEPSEGLHTLYVSPLKALAVDIRRNLVTPIEEMGLDIRVETRTGDTSSDKKARQRVKPP
HILLTTPESLSLLLSYPDAATMFAGLKTIVVDEVHAFATGKRGDLLSLCMARLQHLSPDL
RRVALSATVADPDGYRAWLAPDGDIDAVGLVNGEPGAPSDISILLPKDRIPWAGHSGRYA
AAQVMRVIEANRTTIVFCNTRSLAELIFQDLWKANDKSLPIGVHHGSLSLEARQKVEAAM
ADGQLRALVATASLDLGVDWGDVDCVIQMGAPKGSSRLLQRIGRANHRLDESSRAILVPG
NRFEYLEARAALDAVEAGELDPDLFRPGALDVLAQHVMACACAAPFEQGALLDEIRSAMP
YSALDDETFERVLRFIADGGYALKAYDRFKRLVQQPDGLWRVTHPQFVAQHRLNAGIIVE
ATMLKVRFRNGRQLGRVEEGFAATLAPGDTFFFAGLSLEVESIDGEDLIVRATSRPARIP
TYGGSRMPLSTSLADRVREFLADRREWDRFPPDVHDWLEMQDRRSVLPRRGQLLVETFPR
EGRHYMVAYSFEGWNAHQSLGMLITRRMEAQGLKPLGFVASDYALACYGLEKVTDPASLF
SPDILENEFVDWVQQSHLLKRAFREVAVIGGLVDRQHPGKRKTGRQVIFSTDLIYDVLRK
YEPGHLLLQAAWDDARARMTDVGRLANLLDRAGGTMLHVDLERVSPLAVPVLVLIGREKV
ATGSADDDLLIEAEALAAEAMGE
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgctccccggttcccttccctccgccctgaccgactggttcgccgccaagggctggcaa
ccgcgcacgcaccagttggcgatgctggaggaagcgcgcgccgggcgtcacgcgctgctg
gtcgccaccaccggcgcgggcaagacgctggcggggttcctgccgacgctgaccgaattg
atcgaagagccgagcgaagggctgcacaccctgtacgtctcgccgttgaaagcattggcg
gtcgatatccgccgcaacctcgtcacgccgatcgaagaaatgggcctcgacataagggtc
gagacgcggaccggcgacacgtcgtcggacaagaaggcgcggcagcgggtgaagccgccg
cacatcctgctgaccacgccggaatcgctgtcgctgctgctcagctatcccgatgccgcg
accatgttcgcggggttgaagacgatcgtggtcgatgaagtccacgccttcgccaccggc
aagcgcggcgacctgctgtccttgtgcatggcgcggttgcagcacctgtcccccgatctt
cgccgggtcgcgctgtcggcaacggtggcggacccggatggctatcgcgcctggctcgcg
cccgacggcgacatcgatgcggtcggcctggtcaacggcgaacccggcgcaccgtcggac
atctcgatcctgctgccgaaggatcgtatcccctgggcgggccattcgggccgctacgcc
gccgcgcaggtgatgcgggtgatcgaggcgaaccggaccaccatcgtcttctgcaacacc
cgcagcctcgccgaactcatcttccaggatttgtggaaagcgaacgacaagagcctgccg
atcggtgtccatcacggctcgctgtcgctggaagcgcggcaaaaggtggaagccgcgatg
gcggacggccagctccgcgcactggtcgccaccgccagcctggacctcggcgtcgactgg
ggcgatgtcgattgcgtgattcagatgggcgcacccaaggggtcgtcgcggctgctccaa
cggatcggccgcgccaatcaccggctggacgaatcgagccgcgcgatcctggtccccggc
aatcgcttcgaatatctggaggcgcgcgccgcactcgatgcggtggaggcgggcgaactc
gaccccgacctgttccgcccaggcgcgctcgacgtgctggcgcagcatgtcatggcctgc
gcgtgcgccgcgccgttcgagcagggcgcattgctcgacgagatccgctcggccatgccc
tattcagcgctggacgacgaaacgttcgagcgggtgctgcgcttcatcgcggacggcggc
tatgcgctcaaggcctatgaccggttcaagcggctggtgcagcagccggacggcctgtgg
cgcgtcacccatccgcagttcgtcgcacagcatcgcctcaacgccgggatcatcgtcgag
gcgacgatgctcaaggtccgcttccgcaacggccgccagcttggccgggttgaggaaggc
ttcgccgcgacgctggcgcccggcgacaccttcttcttcgccggtctcagcctggaggta
gaatcgatcgacggcgaggatctgatcgtccgcgcgaccagtcgccccgcgcgcatcccc
acctatggcggcagccggatgccgctatcgaccagcctcgccgaccgggtgcgcgaattt
ctcgcggaccggcgcgaatgggatcgttttcccccggacgtgcacgactggctggagatg
caggaccgccgctcggtcctccctcggcgcggccagctcttggtcgagaccttcccgcgc
gaggggcggcattacatggtcgcctatagcttcgaggggtggaatgcccaccagtcgctg
gggatgctgatcacccggcggatggaggcgcaggggctgaagccgcttggcttcgtcgcc
agcgactatgcgctcgcctgttacgggctggagaaggtcaccgatccggccagcctcttc
tcgcccgacatcctcgaaaacgagttcgtcgattgggttcagcaatcgcacctcctcaag
cgcgcctttcgcgaggtcgcggtgatcggcgggctggtcgaccgccaacatcccggcaag
cgcaagaccgggcggcaggtgatcttttcgaccgacctgatctacgacgtgctgcgcaaa
tatgagccgggccatctgctgctccaggcggcgtgggacgatgcccgggcgcggatgacc
gatgtggggcggctggccaatctgctcgaccgggcgggcggcacgatgctgcacgtcgat
ctggagcgggttagcccgctcgccgtgccggtgctggtgctgatcgggcgggagaaggtg
gcgaccgggagtgcggacgacgatctgttgatcgaggcggaggccttggcggcggaggct
atgggagagtga

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