Sphingomonas paucimobilis: DRN02_012795
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Entry
DRN02_012795 CDS
T06034
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
spau
Sphingomonas paucimobilis
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DRN02_012795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spau03019
]
DRN02_012795
03009 Ribosome biogenesis [BR:
spau03009
]
DRN02_012795
04131 Membrane trafficking [BR:
spau04131
]
DRN02_012795
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spau04147
]
DRN02_012795
Messenger RNA biogenesis [BR:
spau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
DRN02_012795
Ribosome biogenesis [BR:
spau03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
DRN02_012795
Membrane trafficking [BR:
spau04131
]
SNARE
SNARE associated proteins
Others
DRN02_012795
Autophagy
Aggrephagy
Other aggrephagy associated proteins
DRN02_012795
Exosome [BR:
spau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DRN02_012795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_33
AAA_22
CDC48_2
AAA_5
AAA_2
AAA_14
TIP49
IstB_IS21
nSTAND3
AAA_28
NPHP3_N
RNA_helicase
AAA_18
ABC_tran
Zeta_toxin
AAA_7
Mg_chelatase
AAA_24
DUF815
AAA_30
AAA_3
AAA_19
AAA_11
TsaE
Sigma54_activat
AAA_17
Parvo_NS1
SLFN-g3_helicase
ATPase
AAA_lid_PRS2_C
NB-ARC
bpMoxR
Viral_helicase1
PhoH
AAA_25
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
QBE92791
LinkDB
All DBs
Position
complement(2725030..2727321)
Genome browser
AA seq
763 aa
AA seq
DB search
MADSDAPTRKIQVANSRPEDSGRGLAHLPRTLMAALGITEGDVVEIVGKQATPARAVAPY
PEDEGLDLLRIDGLQRANAGVGSGDFVEVRRVESKPATRVVFAPAQQNLRLQGSAQALKR
TFFNRPLCQGDVVATAGQQRVTNMPPGVAQFMNAPAYALQEIRLAVVAASPKGVVHIDEN
TEVELRPEYEEPREARRADVTYDDIGGMASTIDQLREMVELPLRYPELFERLGVEPPKGV
LLHGPPGTGKTRLARAVANESDAQFFLINGPEIMGSAYGESEQRLREIFEEATKSAPSIV
FIDEIDSIAPKRDRVQGEAEKRLVAQLLTLMDGLEARANLVIIAATNRPEAIDEALRRPG
RFDREIVVGVPDERGRREILGIHTRGMPLGDKVDLAELARTTFGFVGADLAALTREAAIE
AVRRIMPRLNLEERTIPAEVLDTLSVTREDFMEALKRVQPSAMREVMVQAPTVRWEDVGG
LDTAQMKLKEGVELPLKDPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAEANFIA
TKSSDLLSKWYGESEQQITRLFQRARQVAPTVIFIDELDSLVPARGGGLGEPQVIERVVN
TILAEMDGLEELQSVVVIGATNRPNLVDPALLRPGRFDELIYVGVPDKAGRRRILGIHTA
KMPLAADVDLDDVAARTDRFTGADLGDVVRRAGLIALRRSIGASEVDMAAFDEALTEARA
SVTPEMERDYEQIAAKLKQEAAAIQPIGFIAPGMLTPRGDKQP
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagcgacgcgccgacccgcaagatacaggtggcgaacagccgccccgaggat
tccgggcgcggcctggcccatcttccgcgcacgctgatggcggcactgggcattaccgag
ggcgatgtcgtcgagatcgtcggcaaacaggcgaccccggcgcgcgccgtcgcgccctat
ccggaagatgaaggcctcgacctgctgcgtatcgacgggttgcagcgggccaatgccggg
gtcggctcgggcgatttcgtcgaggtgcggcgcgtcgaatcgaaacctgcgactcgcgtg
gtgttcgcacccgcccagcagaatctgcggctccaaggttcggcgcaggcgttgaagcgg
accttcttcaatcgtccgctctgtcagggcgacgtggtggcgaccgccgggcaacagcgc
gtcaccaacatgccgccgggcgtcgcgcagttcatgaacgcgccggcctatgcattgcag
gaaatccgcctcgcggtcgtggcggccagccccaagggtgtggtccatatcgatgaaaat
accgaggtcgagttgcgccccgaatatgaggaaccgcgcgaagcccggcgcgccgatgtc
acctatgacgatatcggcggcatggcctcgaccatcgaccagttgcgcgagatggtcgaa
ctgccgctgcgttatcccgaattgttcgagcggctgggcgtcgagccgcccaagggcgtg
ctgctccatggcccgcccggtacgggcaagacgcggctcgcccgtgctgtggccaacgag
tcggatgcgcaattcttcctgatcaacgggccggagatcatgggctcggcctatggcgag
tccgaacagcgcctgcgcgagatcttcgaggaggcgaccaagtccgccccctcgatcgtc
ttcatcgacgagatcgactcgatcgccccaaaacgcgaccgggtgcagggcgaagcggaa
aagcgcttggtcgcgcagctcctcaccctgatggacgggctggaagcgcgcgcgaatctc
gtcatcatcgccgccaccaaccgccccgaggcgatcgacgaggcgctgcggcggccgggc
cggttcgaccgcgaaatcgtggtcggcgtccccgacgagcgcgggcggcgtgagattctg
ggcattcatacacgtggtatgcctttgggagacaaggtcgatctggccgagctggcgcgg
acgaccttcggtttcgtcggcgccgatctggccgcgctgacccgtgaggcggcgatcgag
gcggtgcggcggatcatgccgcgcctcaatctggaagagcggacgatccccgctgaagtg
ctcgacacgctgtcggtgacgcgcgaggacttcatggaggcgttgaagcgcgtccagccc
tcggcgatgcgcgaggtgatggtgcaggcgccgaccgttcgctgggaggatgtcggcggg
ctcgacaccgcgcagatgaagctgaaggaaggcgtcgaactgccgctcaaggacccggat
gccttccggcgcctaggcattcggccggccaagggtttcctgctctatggcccgcccggc
accggcaagacgctactcgccaaggcggtcgcgcgcgaggcggaggcgaatttcatcgcc
accaagtcgagtgacctgctctccaaatggtatggcgagagcgagcagcagatcacccgg
ctgttccagcgggcgcggcaggtggcgccgacggtgatcttcatcgacgaactcgattcg
ctggtgcccgcgcgcggtggcgggctgggcgagccgcaggtgatcgagcgggtggtcaac
accatcctcgccgagatggatgggttggaggagcttcagtcggtcgtcgtcatcggcgcg
accaaccggcccaatctggtcgaccccgcactgctccggccggggcggttcgacgagctc
atctatgtcggcgtgcccgacaaggcggggcgtcggcgaatcttgggcatccacaccgcc
aagatgccgctcgcggcggatgtcgatctggacgatgtggcggcacgcaccgaccgcttc
accggcgcggatctgggcgatgtggtgcgccgcgcgggcctgatcgcgctgcgccgctcg
atcggggcgagcgaggtcgatatggcggcgttcgacgaagcgctgaccgaggcgcgggcg
agcgtcaccccggagatggagcgcgattacgaacagatcgcggccaagctgaagcaggaa
gcggcggcgatccagccgatcggcttcatcgcaccggggatgctgacgccgcgcggcgac
aagcagccgtaa
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