Sphingomonas paucimobilis: DRN02_014670
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Entry
DRN02_014670 CDS
T06034
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spau
Sphingomonas paucimobilis
Pathway
spau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DRN02_014670 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spau03019
]
DRN02_014670 (recQ)
03400 DNA repair and recombination proteins [BR:
spau03400
]
DRN02_014670 (recQ)
Enzymes [BR:
spau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DRN02_014670 (recQ)
Messenger RNA biogenesis [BR:
spau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DRN02_014670 (recQ)
DNA repair and recombination proteins [BR:
spau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DRN02_014670 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
RQC
Helicase_C
RecQ_Zn_bind
ResIII
DNA_pol_A_exoN
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QBE93103
LinkDB
All DBs
Position
complement(3108626..3110395)
Genome browser
AA seq
589 aa
AA seq
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MVADPLAKLHEVFGYSQFRGVQEQVVDRVLGKQRTLAVMPTGAGKSLCYQLPAVMMNGCC
VVVSPLIALMHDQLRAAEAVGIRAATLTSVDQNRAETVARFRDGQLDLLYVAPERASSGH
FRELLASAPLSLFAIDEAHCVSEWGHDFRPDYRLLEPLMDAFPEVPRLALTATADAHTRA
DIAKQLGIPVEGMIVSGFDRPNIRYAISPKANVNLQIARVVADTPGPGIVYAQTRAATEK
LAEALARTGRPVRAYHAGLDPAIRAKNQADFVASEDMVICATVAFGMGIDKPDVRFVAHA
GLPKSIEAYYQETGRAGRDGDPSVAHLFWGADDFARARQRIAEVEPERQPGERARLSALG
ALVETGGCRRRILLRHFGEELAEDCGNCDNCLGSPDAVDATTTAQKFLSAVFRTGQMFGA
GYIEQVLTGQSSERSLMNGHEALSVWNIVDGDEVALLKPVHRALLLRDALRTNPHGGLEF
GPAARALIKGEARLSLVVPPKRERKGRRAAPVAANPADNPLFEALRAKRRELAQEAGVPP
YVIFHDSVLRDMAAQRPNSRAALSLLSGIGARKLDAYGEAFLAVIRDAG
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgacccccttgccaagctccatgaagtcttcgggtacagccagttccggggt
gtccaggaacaggtggtcgaccgcgtgctcggcaaacagcggactttggcggtcatgccg
accggcgcgggcaagtcgctgtgttaccagctgcccgcggtgatgatgaacggatgttgc
gtcgtggtcagcccgctgatcgcgctgatgcacgaccagttgcgcgccgccgaagcagtc
ggcatccgcgccgccacgctgaccagcgtcgaccagaaccgcgccgagacggtcgcgcgc
ttccgcgacggccagctcgaccttctgtatgtcgcgcccgagcgcgcttcgtcggggcat
ttccgcgagctgctggcctccgcgccgctcagcctgttcgcgatcgacgaggcgcactgc
gtcagcgaatgggggcatgacttccgccccgattaccggctgctcgaaccgttgatggat
gcctttccggaggtgccccggctggcgctgaccgcgaccgccgatgcgcatacccgcgcc
gacatcgccaagcagctgggcattccggtcgaggggatgatcgtctcgggcttcgatcgg
cccaatatccgctatgcgatcagccccaaggccaatgtgaacctgcagatcgcgcgggtg
gtcgccgacacgccgggccccggcatcgtctatgcccagacgcgcgccgcgaccgagaaa
ctggcggaagcgctggcgcggacggggcggccggtgcgcgcctatcatgcgggactcgac
ccagcgatccgcgccaagaaccaggccgatttcgtcgcgagcgaggacatggtgatctgc
gcgaccgtcgccttcggcatggggatcgacaagcccgatgtgcgcttcgtcgcccatgcc
gggctgcccaagtcgatcgaggcctattatcaggagacggggcgcgccgggcgcgacggc
gacccttccgtcgcgcatctcttctggggcgccgacgattttgcgcgggcccgccaacgc
atcgccgaggtcgaacccgaacgccagcccggcgagcgtgcacgcctgtccgctctcggt
gcgctggtcgagacgggcgggtgccgccgccgcatcctgctacgccattttggcgaggag
ctggcggaggattgcggcaattgcgacaattgcctggggtcgcccgatgcggtcgatgcg
acgaccaccgcgcagaaattcctctctgccgtgttccgcaccggccagatgttcggcgcg
ggctatatcgagcaggtgctgactggccagtcgagcgagcgcagcctgatgaacgggcat
gaggcgctgtcggtgtggaacatcgtcgacggcgacgaggtggcgttgctcaagccggtg
caccgcgcgctgttgctgcgcgatgcgttgcgcaccaatccccatggcgggctggagttc
ggccccgccgcgcgtgcgctgatcaagggcgaggcgcggctgtcgctggtcgtgccgccc
aagcgggagcgtaaaggccgccgcgccgcgcccgtggccgccaatccggccgacaatccg
ctgttcgaggcgctgcgcgccaagcgtcgcgagctggcgcaggaggcgggcgtgccgcct
tacgtcatcttccacgactcggtgctgcgcgacatggcggcgcagcggccgaacagccgc
gcggcgctgtcgctcctgtccgggatcggcgcgcgcaagctggatgcttatggcgaggcc
tttctggcggtgatccgcgacgccggctaa
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