Sphingomonas paucimobilis: DRN02_016335
Help
Entry
DRN02_016335 CDS
T06034
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
spau
Sphingomonas paucimobilis
Pathway
spau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DRN02_016335 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spau03400
]
DRN02_016335 (ruvB)
Enzymes [BR:
spau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DRN02_016335 (ruvB)
DNA repair and recombination proteins [BR:
spau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DRN02_016335 (ruvB)
RecFOR pathway proteins
DRN02_016335 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
Sigma54_activat
AAA_18
AAA_2
nSTAND3
AAA_17
AAA_14
RNA_helicase
TsaE
Bac_DnaA
Rad17
AAA_28
AAA_25
ABC_tran
NTPase_1
NB-ARC
NACHT
AAA_24
AAA_33
IstB_IS21
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QBE93389
LinkDB
All DBs
Position
3495485..3496510
Genome browser
AA seq
341 aa
AA seq
DB search
MTDQDRLLSASRRPEDVDAALRPKSLDEFVGQHAARDNLRVFIQAAKGRGDALDHVLFFG
PPGLGKTTLAQIIAREMGVGFRATSGPVIAKSGDLAALLTNLEDGDVLFIDEIHRLQPAV
EEVLYPAMEDRVLDLMIGEGPSARSVRIDLPRFTLVGATTRQGLLTTPLRDRFGIPVRLQ
FYTVEELTRVVTRAARLLDLPIAEDGAIEVARRSRGTPRIAGRLLRRVRDFASVAGHEIV
HAAAADQALNRLEVDSLGLDAMDRRYLTMIADVYRGGPVGVETLAAGLSEPRDTIEEVIE
PYLIQLGLLARTARGRILNPGGWKHLGLNPPVGSQDGLFDT
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcaggatcgcctcttgtccgccagccgccgtcccgaggatgtcgatgctgcg
cttcgtccgaagagcctggacgagtttgtcggccagcatgcggcgcgcgacaacctccgt
gtcttcattcaggccgcgaaagggcgtggcgatgcgttggaccatgtgctgttcttcggg
ccgccggggctgggcaagaccacgttggcgcagatcattgcgcgcgaaatgggggtgggc
ttccgcgcgacctcgggcccggtcatcgccaagtcgggagacctcgccgcgctgctgacc
aatcttgaggatggcgacgtcctgttcatcgacgagattcaccgcctgcaaccggcggtc
gaggaagtgctctatccggcgatggaggaccgtgtcctcgacctgatgatcggggaaggc
ccctcggcgcggtcggtgcggatcgatttgccgcgcttcacgcttgttggagcgacgacg
cggcaggggttgctgaccacgccgctgcgcgatcgtttcggcattccggtgcggttgcaa
ttctatacggtcgaggaattgacccgcgtggtgacgcgtgccgcgcggctgctcgacctg
ccgatcgccgaggatggcgcgatcgaggtcgcgcggcgttcccgcggcacgccgcgtatc
gccgggcggctgctgcgccgggttcgcgacttcgccagcgtggcggggcatgagatcgtc
catgccgccgccgccgaccaggcgctcaaccggctggaggtcgactcgctggggctggat
gcgatggaccggcgctatctgaccatgatcgccgatgtctatcgcggcggcccggtcggg
gtggagacgctcgccgctggcctgtccgaaccgcgcgacacgatcgaggaggtgatcgag
ccctatctcatccagctcggcctgctggcgcggacggcgcgggggcgaatcttgaacccg
ggcggatggaagcatctgggcctcaatcctccggtcgggtcgcaggacggattgttcgac
acctga
DBGET
integrated database retrieval system
