Streptomyces parvulus: Spa2297_07500
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Entry
Spa2297_07500 CDS
T04685
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spav
Streptomyces parvulus
Pathway
spav00040
Pentose and glucuronate interconversions
spav01100
Metabolic pathways
spav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Spa2297_07500
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spa2297_07500
Enzymes [BR:
spav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Spa2297_07500
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
ANJ06854
UniProt:
A0A191UVV3
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All DBs
Position
complement(1618529..1619860)
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AA seq
443 aa
AA seq
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MESRTMHLRRIGLLAGCTALVLTLTAAAATAQARPGHHPPRDAARQTLPAKDGWASAGAG
TTGGAAAEAARVFTVTDWDGFRAALAVGGTAPRIIKVKGTVDAVAAGCDAFAAPGYDFDA
YLEKYSPETWGLESDLSAEPDDSPEGLRRASAARQDASVKAYVPANTTIIGVGRDAGLKG
ASLQIKDVDNVIVRNLTFESPVDCFPQWDPTDGDKGNWNSEYDSAVVYGSTHVWLDHNTF
TDGDHPDSAAPTHFGMLYQQHDGQLDVVRGADLVTASWNVFTEHDKTILIGNSDSESTAA
DDRGHLRTTFHHNLFKDLVERAPRVRFGQVDVYNNHFVAGEDHAYSLGVGKESQLVAEHN
AFTLPAGVTAANVLKRWNDAPLTAAHNRVNGRTTDLIAAHNAQFPQTPLRAGTGWTPSLR
TGVLPAWAVPVAVGLGAGAGRLR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagagccgcactatgcatctgcgcagaattggcctgctggccggctgtaccgccctc
gtgctgaccttgaccgccgccgccgccaccgcccaggcccggcccgggcatcatccgccg
cgcgatgccgcccggcagacgctgcccgcgaaggacgggtgggcctcggcgggggccggg
accaccggcggggccgccgccgaggccgcccgggtcttcaccgtcaccgactgggacggc
ttccgcgccgccctcgccgtcggaggcaccgcgccgcggatcatcaaggtgaagggcacg
gtggacgccgtcgccgcgggatgtgacgccttcgccgcgcccggctacgacttcgacgcc
tacctggagaagtactccccggagacctggggcctggagagcgacctgagcgccgagccc
gacgacagccccgaggggctgcgccgcgcctccgccgcgcggcaggacgcgtccgtcaag
gcgtacgtccccgccaacaccacgatcatcggcgtcggccgcgacgccgggctcaagggg
gcgagcctccagatcaaggacgtggacaacgtcatcgtccgcaacctcaccttcgagagc
cccgtcgactgcttcccgcagtgggaccccacggacggcgacaagggcaactggaactcc
gagtacgacagcgccgtcgtgtacggatcgacgcacgtctggctcgaccacaacacgttc
accgacggcgaccaccccgacagcgcggcgcccacccacttcggcatgctctaccagcag
cacgacggccagctcgacgtcgtgcgcggcgcggacctcgtgaccgcgtcctggaacgtc
ttcaccgagcacgacaagacgatcctgatcgggaacagcgacagcgagtccacggccgcc
gacgaccgcggacacctgaggacgaccttccaccacaacctgttcaaggacctcgtcgag
cgggcgccccgggtgcgcttcgggcaggtcgacgtctacaacaaccacttcgtcgcgggc
gaggaccacgcctacagcctcggcgtcggcaaggagtcccagctcgtcgccgagcacaac
gccttcacgctgcccgccggcgtcaccgccgccaacgtgctcaagcgctggaacgacgcg
ccgctcaccgccgcccacaaccgggtgaacggccgcaccaccgacctgatcgccgcgcac
aacgcacagttcccccagacgcccctgcgcgccggcaccggctggacccccagcctgcgg
accggggtcctgcccgcctgggcggtcccggtggccgtgggtctcggggccggcgccgga
cgcctgcgctga
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