Streptomyces parvulus: Spa2297_08425
Help
Entry
Spa2297_08425 CDS
T04685
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spav
Streptomyces parvulus
Pathway
spav03030
DNA replication
spav03430
Mismatch repair
spav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spa2297_08425
03430 Mismatch repair
Spa2297_08425
03440 Homologous recombination
Spa2297_08425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spav03032
]
Spa2297_08425
03400 DNA repair and recombination proteins [BR:
spav03400
]
Spa2297_08425
Enzymes [BR:
spav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spa2297_08425
DNA replication proteins [BR:
spav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spa2297_08425
DNA repair and recombination proteins [BR:
spav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spa2297_08425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Tsr1_G-like
Motif
Other DBs
NCBI-ProteinID:
ANJ07026
UniProt:
A0A191UWA5
LinkDB
All DBs
Position
complement(1819632..1823171)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMSHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWATNRTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGIVASTGCPSGEVQTRLRLGHFDEALQAASDYQD
IFGKDRYFLELMDHGIEIEHRVRDGLLEIGRKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCANTRLIAEMIDTTGMFEKRD
LMPKFDIPDGFTEVTWFQEEVRRGMERRFSGQVPEDRQKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDSTHPRYSEAGEIRSMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGVDLDLLSLPLDDPTTFDLLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNNLQEITPIHKELEEPLQEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFVLFQEGARKKGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
MSNFAAQGDDVILFGLSAVRNVGTNVVESIIRCRKAKGKYASFPDYLDKVEAVVCNKRTT
ESLIKAGAFDEMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGDEQSDEPGFGL
DVVFGEDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGISQLTGGDFGDGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSLECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSNAGTNAPVVLTIPATRVTPPMVSRLGEILTHHRGDSEVRI
KLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcgacgcctgcaatgagatgggcatgtcacacatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccactcggcgaagaaggcc
ggggtcacgccgatcatcggcatcgaggcctacgtcgcccccgagtcgcggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtctcgggttccggcggc
tacacccacaagacgatgtgggcgaccaaccggaccggcctgcacaacctcttcaagctc
tcctcggacgcctacgccgagggctggctccagaagtggccccggatggacaaggagacc
atctcccagtggtccgagggcatcgtcgcctccaccggctgcccctccggcgaggtgcag
acccggctgcgcctcggccacttcgacgaggccctccaggccgcctccgactaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcac
cgggtccgcgacggcctcctggagatcggccgcaagctcggcatcccgcccctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgaccgcccacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgaccccgaccgcttccgcttcgacggcaccgggtactac
ctgaagtcgacggacgagatgtacgccatcgactcctccgacgcctggcaggagggctgc
gccaacacgcgcctgatcgccgagatgatcgacaccaccggcatgttcgagaagcgcgac
ctcatgccgaagttcgacatccccgacggcttcaccgaggtcacctggttccaggaggag
gtccgccgcggcatggagcgccgcttctcgggccaggtccccgaggaccgccagaagcag
gcggagtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaaccagggcatcgcggtcggccccggccgaggctcc
gcggccggttcgatcgtggcctacgcgatgggcatcaccgacctcgaccccatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccggctcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgactcgacccacccccgc
tacagcgaggccggcgagatccgctcgatgtacgagaacgagccggacgtcaagaaggtc
atcgacaccgccaagggcgtcgagggactggtccggcagatgggtgtgcacgcggccggc
gtgatcatgtccagcgagcccatcgtcgaccacgccccgatctgggtgcggcacaccgac
ggcgtgaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaagtcc
aacaagggcgtcgacctcgacctgctgtccctgccgctggacgacccgacgaccttcgac
ctcctccagcgcggcgacacgctcggcgtcttccagttcgacggcggtcccatgcgctcg
ctgctgcggctgatgaagcccgacaacttcgaggacatctccgccgtctccgcgctatac
cgtccgggcccgatgggcatggactcgcacaccaactacgcgctgcgcaagaacaacctc
caggagatcacgccgatccacaaggagctggaggagcccctccaggaggtcctcgcggtc
acctacggcctgatcgtgtaccaggagcaggtgcagaaggccgcccagatcatcgcgggc
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgacgaa
ctggcgaagaacttcgtcctcttccaggagggcgcccgcaagaagggctacagcgacgag
gccatccaggccctgtgggacgtcctggtccccttcgccggctacgcgttcaacaaggcg
cactccgccgcgtacggcctggtctcgtactggacggcgtacctcaaggccaactacccg
gccgagtacatggccgccctgctcacctcggtcaaggacgacaaggacaagtcggccgtc
tacctgaacgagtgccggcgcatgggcatcaaggtgctcccgcccaacgtcaacgagtcc
atgtcgaacttcgccgcccagggcgacgacgtgatcctcttcggcctctccgccgtccgc
aacgtcggtaccaacgtggtcgagtcgatcatcaggtgccgcaaggcgaaggggaagtac
gcctccttccccgactacctggacaaggtcgaggcggtcgtctgcaacaagcggaccacc
gagtcgctgatcaaggccggcgccttcgacgagatggggcacacccgcaagggcctcacc
gcgcagtacgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggcgacgagcagagcgacgagccgggcttcgggctc
gacgtcgtcttcggcgaggacgagtgggacaagacctacctgctcgcccaggagcgggag
atgctcggtctctacgtctccgaccacccgctcttcggcctggagcacgtgctgtccgac
aaggccgacgcgggcatctcccagctcaccggcggtgacttcggggacggcgcggtcgtg
accatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtcgaggacctggccggttcgctggagtgcatgttcttcccggcgacc
taccagctggtgtccacccaactcgtcgaggacgcggtggtcttcgtcaagggcaggctc
gacaagcgggaggacgtaccgcggctggtcgcgatggagctccaggtccccgacctgtcc
aacgcgggcaccaacgcgcccgtggtcctcaccatcccggccacccgcgtcacgccgccg
atggtcagccgcctcggcgagatcctcacccaccaccggggcgacagcgaggtgcggatc
aagctccagggcccgacgaagacgacggtcctccggctggaccggcaccgggtcaagccc
gatccggcgctgttcggcgacctgaaggtgctgctcggcccgtcctgcctggcgggctga
DBGET
integrated database retrieval system
