Streptomyces parvulus: Spa2297_19270
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Entry
Spa2297_19270 CDS
T04685
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spav
Streptomyces parvulus
Pathway
spav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Spa2297_19270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spav03019
]
Spa2297_19270
03400 DNA repair and recombination proteins [BR:
spav03400
]
Spa2297_19270
Enzymes [BR:
spav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spa2297_19270
Messenger RNA biogenesis [BR:
spav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Spa2297_19270
DNA repair and recombination proteins [BR:
spav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Spa2297_19270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANJ11586
UniProt:
A0A191V984
LinkDB
All DBs
Position
4231973..4233970
Genome browser
AA seq
665 aa
AA seq
DB search
MGGTGVIGEMAEAAVTGAGDGGRSEALATLHRVFGYESFRGEQEEVVDHVVAGGDAVVLM
PTGAGKSLCYQIPALVRPGTGIVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERRVV
EAEFLAGELDLLYLAPERLRLQGTLDLLSRGKISLFAIDEAHCVSQWGHDFRPDYLALSL
LGEHWPEVPRLALTATATHATHRELTERLNMPTARHFVASFDRPNIQYRIVPKTDPRKQL
LHFLREEHAGDAGIVYCLSRNSVEKTAEFLSRNGVEAVPYHAGLDAGTRAAHQSRFLREE
GLVVVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVV
QQRKLIQSGEGDEAFRRRAQSHLDSMLALCETVRCRRGQLLAYFGQEPDPAGCGNCDTCL
TPPETWDGTVAAQKVLSTVVRLKRERGQKFGAGQIIDILLGKRTAKVIQFDHDQLSVFGI
GEDLAESEWRGVARQLLAQGLLAVEGEYGTLVLTDDSGAVLRREREVPLRKEPKKPASAR
GTGTRGERKAKAAVAELPEELQPAFEALRAWRAERAREQGVPAYVIFHDATLREIATVWP
TSVAQLGGISGVGEKKLATYGEGVVAVLAGLSGAAQAAPAPGGDAGDGPDDWPDTEPDPE
PEDWI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggacgggtgtgatcggcgagatggcagaggcggcagtgaccggggccggggac
ggcgggcgcagcgaggcgctggccacgctgcaccgggtcttcgggtacgaatcgttccgc
ggcgagcaggaagaggtcgtcgaccacgtggtggcgggcggcgacgccgtcgtgctcatg
cccaccggcgccggcaagtcgctgtgctaccagattccggccctggtcaggcccggcacc
ggcatcgtggtctcgccgctcatcgcgctcatgcaggaccaggtggacgcgctgcgggcc
ctgggcgtgcgggccggcttcatgaactccacgcaggacttcgacgagcggcgcgtggtg
gaggccgagttcctcgccggcgagctggacctgctctacctggcccccgagcggctgcgc
ctccagggcaccctcgacctgctctcccgcggcaagatctcgctgttcgccatcgacgag
gcgcactgcgtctcgcagtggggccacgacttccgccccgactacctcgccctgtcgctg
ctcggcgagcactggccggaggtcccgcggctcgcgctgacggcgacggccacccacgcc
acccaccgcgagctgaccgagcggctgaacatgccgacggcgcggcacttcgtggccagc
ttcgaccgccccaacatccagtaccggatcgtgccgaagacggaccccaggaagcagctg
ctgcacttcctgcgcgaggagcacgcgggcgacgcgggcatcgtgtactgcctctcgcgc
aactcggtcgagaagaccgccgagttcctctcccgcaacggtgtggaggcggtgccgtac
cacgcgggcctcgacgccggcacccgcgccgcccaccagtcccgcttcctgcgggaggag
ggcctggtggtggtggcgaccatcgccttcggcatgggcatcgacaagcccgacgtccgc
ttcgtcgcccacctcgacctgccgaagtcggtcgaggggtactaccaggagaccggccgc
gccggccgcgacggactcccgtcgacggcgtggatggcgtacgggctcaacgacgtcgtg
cagcagcgcaagctgatccagtcgggggagggcgacgaggccttccgccgccgggcccag
tcccacctggactccatgctcgcgctgtgcgagaccgtccgctgccgccgcggccagctc
ctcgcctacttcggccaggagccggacccggccggctgcgggaactgcgacacctgcctc
accccgccggagacctgggacggcacggtcgcggcgcagaaggtgctgtccacggtggtg
cggctgaagcgggagcgcgggcagaagttcggcgccgggcagatcatcgacatcctgctg
ggcaagcgcaccgccaaggtcatccagttcgaccacgaccagctctccgtgttcggcatc
ggcgaggacctcgccgagagcgagtggcggggcgtcgcccggcagctgctcgcccagggc
ctcctcgccgtcgagggggagtacggcacgctggtgctgaccgacgacagcggggcggtg
ctgcgccgggagcgggaggtgccgctgcgcaaggagcccaagaagccggcgtccgcgcgc
gggacgggcacgcgcggcgagcgcaaggccaaggccgcggtggccgagctgcccgaggaa
ctgcagccggcgttcgaggcactgcgcgcctggcgtgccgagcgcgcccgcgagcagggc
gtcccggcctacgtgatcttccacgacgcgacgctcagggagatcgccacggtgtggccc
acctccgtcgcgcagctcggcggtatcagcggcgtcggtgagaagaagctcgcgacctac
ggggagggggtcgtcgccgtcctggccggactgtcgggtgcggcccaggcggctcccgcc
ccgggcggcgacgccggggacggcccggacgactggcccgacaccgagcccgacccggag
cccgaggactggatatag
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