Streptomyces parvulus: Spa2297_24625
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Entry
Spa2297_24625 CDS
T04685
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spav
Streptomyces parvulus
Pathway
spav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Spa2297_24625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spav03019
]
Spa2297_24625
03400 DNA repair and recombination proteins [BR:
spav03400
]
Spa2297_24625
Enzymes [BR:
spav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spa2297_24625
Messenger RNA biogenesis [BR:
spav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Spa2297_24625
DNA repair and recombination proteins [BR:
spav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Spa2297_24625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
ANJ09878
UniProt:
A0A191V4P7
LinkDB
All DBs
Position
complement(5438555..5440720)
Genome browser
AA seq
721 aa
AA seq
DB search
MEHTSNPDLRTAADTVLARLVGDASGEAKLREDQWRAIEALVAERRRALVVQRTGWGKSA
VYFVATALLRDRGAGPTVIVSPLLALMRNQVEAAARAGIRARTINSSNTEEWDTVQDEIA
AGEVDVLLVSPERLNNPDFRDQVLPKLSAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
TDLPPGVPVLATTATANARVTADVAEQLGTGGTSDALVLRGPLDRESLSLGVLRLPDAAH
RMAWLADHLDRLPGSGIIYTLTVAAAEEVTAFLRQRGHTVASYTGKTENADRQQAEDDLL
ANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGKE
DEAIWQYFASLAFPSEELVRRTLDILGRAERPLSLPALEPLVELRRSRLETMLKVLDVDG
AVKRVKGGWIATGQPWTYDAERYDWVARQRDAEQQSMRDYAATSECRMEFLQRQLDDEGA
KPCGQCDNCAGARFTADTSADSLDAARDDLGRAGVEVEPRRMWPTGLPAIGVDLKGRIPA
KEQAAPGRALGRLSDIGWGNRLRPMLAAQAPDGPVPDDVAKAVVTVLADWAKGPGGWAQG
AAEAPPRPVGVVTVASSTRPQLIHSLGTRIAEIGRLPLLGRVEYAGEAPGGSRSNSAQRL
KALDGALTVPDALASALAGLDGPVFLVDDCTETGWTLAVTARLLRRAGAQGVLPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagcacacgagcaacccggatctccggacagcggccgacacggtcctcgcccgcctc
gtcggcgacgcctccggcgaggccaagctgcgggaggaccagtggcgggccatcgaggcg
ctggtcgccgagcggcgccgggccctggtcgtccagcgcacggggtggggcaagtccgcg
gtgtacttcgtggcgaccgccctgctgcgggaccggggcgccggtccgacggtcatcgtg
tccccactgctcgcgctcatgcgcaaccaggtcgaggccgcggcccgggccggcatccgt
gcccggaccatcaactcctccaacaccgaggagtgggacacggttcaggacgagatcgcg
gccggtgaggtcgacgtcctgctggtgagtcctgagcggctcaacaacccggacttccgc
gaccaggtactgcccaagctctccgccgcgaccggactgctggtggtcgacgaggcccac
tgcatctccgactggggccacgacttccgccccgactaccggcggctgcgcaccatgctc
accgacctccccccgggagtccccgtcctggcgaccacggccacggccaacgcgcgcgtg
acggccgacgtggcggagcagctcggtacgggcggtacgtccgacgccctggtgctgcgc
ggtccgctggaccgggagagcctgagtctgggggtgctgcgactgccggacgcggcgcac
cggatggcctggctcgcggaccacctcgaccggctcccgggttccgggatcatctacacg
ctcaccgtggccgccgccgaggaggtcacggcgttcctgcgccagcgcggccacaccgtg
gcctcctacaccggcaagacggagaacgcggaccggcagcaggccgaggacgacctgctg
gccaaccgggtcaaggcgctggtcgccacgtcggcgctggggatgggtttcgacaaaccc
gacctgggtttcgtggtgcacctgggctccccgtcctcccccatcgcctactaccagcag
gtcggccgcgccggacgcggtgtcgagcacgccgaggtcctgctgctgcccggcaaggag
gacgaggcgatctggcagtacttcgcctcgctggccttcccgtcggaggagttggtgcgc
cgcaccctggacatcctcgggcgggcggagcgtccgctgtcgctgccggcgctggaaccg
ctggtggagctgcgccgctcccgactggagaccatgctgaaggtcctcgacgtggacggg
gccgtcaagcgggtcaaggggggctggatcgcgaccggacagccgtggacgtacgacgcg
gagcggtacgactgggtcgcgcgccagcgggacgccgagcagcagtcgatgcgcgactac
gcggcgacgtcggaatgccggatggagttcctgcaacggcagctggacgacgagggcgcg
aagccctgcggccagtgcgacaactgcgcgggagcccgtttcacggccgacacctccgcc
gactccctcgacgccgctcgggacgacctggggcgggccggcgtcgaggtggagccgcga
cgcatgtggcccaccgggctcccggcgatcggcgtcgacctcaagggccgcattcccgcg
aaggaacaggccgcgccgggcagagcgctgggcaggctctccgacatcggctggggcaac
cggctgcggccgatgctcgcggcccaggcaccggacggccccgtgccggacgacgtcgcc
aaggccgtggtgacggtactggccgactgggcgaagggccccggcggctgggcccagggc
gcagccgaagccccgccgcggcccgtcggcgtggtgaccgtcgcctcgagcacccggccg
cagctgatccactccctcggtacccggatcgccgagatcggcaggcttccgctgctcggt
agggtcgagtacgcgggtgaggcgccgggcggttcccgcagcaacagcgcgcagcggctc
aaggcgctggacggcgcgctgactgtgcctgacgccctcgcgtcggccctcgccggactg
gacgggccggtgttcctcgtggacgactgcaccgagaccgggtggaccctcgcggtgacc
gcccgcctgctccgccgcgccggcgcccagggggtgctgccgctggtcctggcggtgcag
gggtga
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