Sphingobacterium paramultivorum: HS960_01905
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Entry
HS960_01905 CDS
T11287
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
spay Sphingobacterium paramultivorum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
mRNA_cap_enzyme
DNA_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QMV66482
UniProt:
A0A7G5DXK7
LinkDB
All DBs
Position
484113..486851
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AA seq
912 aa
AA seq
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MGLSKYREKRSAGKTPEPFGGRSSGKELWFVVQKHDASHLHYDFRLEMNGVLKSWAIPKG
PSMDPSVKRLAMMVEDHPYDYRNFEGIIPKGQYGGGTVIVWDEGSYEALAPETNDVAKMD
KNLRHQLYSGKLKFRLYGEKLKGEFALVKAYGRGGNEWLLMKLEDQYATSKDVIAKDKSV
LSGKTIAEMEKSPDKVYGQPVVKKNSISKNKSKKSWNAAEIISGQLEELPKKKTAETLKQ
AYNITDLLKKSPKQVFYTAVQPMLATLIDKPFDDQNWVYEVKWDGYRALAFMKNGKIELK
SRNDKSFNEKFYPVYDTLKSIVINAILDGEILVLEKNGTANFAALQNWRSEADGDLVYYV
FDILWYDGKDLKGLSLLERKAILKEVMPQNDLILLSEHFDTSGVGFLNEAKKLGIEGVMA
KRKESVYHIHERSSDWLKIKANRRQEVVIGGFTKNEGSSKLFSSLLVGLYEGKKLIYTGK
VGTGFSAKLQQELMVQFKPLVTKNSPFDDEPDINKSSRFRPRPPHTAVTWLHPNLVCEVS
FTEMTVDGVMRHPSFDGMRNDKNAKKVILEEEQAVNEIIGKQSKEGDGMRKNSKEGSSDK
KNYKTMLNPKDKTQVQKVNGHELKFTNLDKLFWPDEKITKRDLINYYEQAAPFILPYLKD
RPQSMNRYPNGIKEEGFYFKDVTDTAPEWAETYLYQSEADGRDRHYLVGKDEATLLYMAN
LGCIEMNPWSSTVRKPDNPTFCIIDLDPDKNTFDQVIETAQLTKQLLDDMGVPSYCKTSG
STGLHIYIPLGNKYNYDQSKEFAHIIVTLIHAELPEYTSLERTVRDRKGKMYLDFLQNRP
HATIAAAYSVRPKPGATVSMPLHWDEVKKGLKISDFTLFNAIERMHELGDIFKPVLGKGI
DLKKVIDTLSKK
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgtcaaaatatcgcgaaaagcgttccgcaggaaaaacaccggaaccctttgga
ggtagatcaagcggaaaggaattgtggttcgtcgtgcagaagcatgatgcttcgcatctg
cattatgattttcggcttgaaatgaacggggtgctcaaaagttgggcgattcctaagggg
ccatctatggacccatctgtcaaacgcttggccatgatggttgaagatcatccttacgat
taccggaattttgaaggtatcataccaaaaggacagtatggtggtggtacagttatcgtg
tgggatgaagggagctatgaagctttagctcctgaaaccaatgatgttgcaaaaatggat
aagaatcttcgacatcagctttatagcggaaagctcaaattcagattgtatggagaaaaa
ttgaagggagaatttgctttggtaaaagcatacggaagaggaggaaatgaatggctactg
atgaagttggaagatcaatatgcaacaagcaaggatgttatagcaaaggataaatccgta
ttgtcgggaaagacgatagcggaaatggaaaaatcgcccgataaagtctatggacagcct
gttgttaaaaagaatagtatatcaaaaaataaaagcaagaaaagttggaatgctgctgaa
ataatcagcggccaattggaagaactgcctaaaaagaaaacggctgagacgctgaaacaa
gcgtataatatcaccgacttgctaaagaaatcaccgaagcaagtcttttatactgcggtg
cagcccatgctggcgacgctgatcgacaagccttttgatgatcaaaattgggtatacgag
gtgaaatgggacggttatcgtgctttggcctttatgaaaaatggcaaaatagaactaaaa
tccagaaatgacaaaagcttcaatgaaaagttttatccagtatatgataccctgaaaagc
atcgtgatcaatgccatactcgatggcgagatccttgtattggaaaaaaatggaacggcc
aactttgctgccctacaaaactggagaagtgaggcggatggcgatttggtatattatgta
tttgatatcctttggtacgatggaaaagatctaaaaggtctttcgctattggaaagaaaa
gcgattttaaaggaagtaatgccgcaaaacgatttgattttattgagtgaacatttcgat
acatcgggcgttggatttttgaatgaagccaaaaaactcggtatagagggggttatggcc
aaacgcaaggaaagcgtttaccatatacatgagcgttcatctgactggttgaaaatcaag
gctaataggcgtcaggaggttgttattggcggttttacaaagaacgaaggctcaagcaaa
ctgtttagtagcctattggtaggcctatatgaaggtaaaaagcttatttataccggaaag
gtcggaacaggattcagtgcaaaattacaacaagagctgatggtgcagttcaaacccttg
gtcacaaaaaatagtccgtttgatgacgaacccgatatcaacaaatcctcacgatttaga
ccccgccctcctcataccgctgtcacctggctacatcccaacctggtttgcgaagtgagc
tttacagaaatgaccgttgacggcgttatgcgacatccctcatttgacggcatgcgtaac
gataaaaatgccaaaaaagtgattttggaagaagagcaggccgttaatgagattattggc
aaacaatcaaaagagggagatgggatgcgaaagaatagtaaggaaggcagttcggataag
aaaaactataaaacaatgctaaaccccaaagacaaaacccaggttcagaaggtaaatgga
catgagttaaaatttaccaacctcgataaactattttggcctgacgaaaagatcaccaag
cgcgatttaattaattactatgagcaggctgcaccttttattttaccataccttaaagat
cgaccacaaagcatgaatcgatacccaaatggtatcaaagaagaagggttctatttcaag
gatgttactgatacagcaccggaatgggcagaaacttatctttaccaaagtgaggccgat
ggccgtgatcggcattatctggtcggaaaagacgaggctacattgttatatatggctaat
cttggctgtatcgaaatgaatccctggagtagtaccgtcagaaaaccggataatccgacc
ttttgtatcattgatctggatccggataaaaatacatttgatcaggttattgaaaccgcc
cagctcaccaaacaacttttagatgatatgggggtaccttcgtattgtaaaacaagtggt
tccacgggacttcacatatatataccattaggaaataaatataattacgatcagtccaag
gagtttgcgcatattattgtcaccctgattcatgcggagctacccgaatataccagttta
gagcgaactgttcgtgatcggaaaggtaaaatgtatcttgattttcttcaaaatagacca
catgctaccattgctgcagcatattcagtacgtcccaagcctggagcgacagtgtccatg
ccattacattgggatgaagttaaaaaagggttgaaaattagtgatttcaccttgtttaat
gcgattgaaagaatgcatgagctgggggatatctttaaacctgtattggggaaagggatc
gatctgaaaaaagtaattgatacactctcaaaaaaatag
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