Streptomyces parvus: ABXI76_04745
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Entry
ABXI76_04745 CDS
T10675
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
spaz Streptomyces parvus
Pathway
spaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABXI76_04745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spaz03000
]
ABXI76_04745
03400 DNA repair and recombination proteins [BR:
spaz03400
]
ABXI76_04745
Enzymes [BR:
spaz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ABXI76_04745
Transcription factors [BR:
spaz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ABXI76_04745
DNA repair and recombination proteins [BR:
spaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABXI76_04745
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
XCM28773
LinkDB
All DBs
Position
complement(1205208..1206680)
Genome browser
AA seq
490 aa
AA seq
DB search
MHTDTERCVRAVQSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKTRNMTFYPSAAACQQA
GFRACKRCRPDTSPGSPEWNARADSVARAMRLIQDGVVDREGVPGLAARLGYSARQIERQ
LLAELGAGPLALARAQRAQTARLLIETTELPMAQVAFAAGFASIRTFNETVREVFALAPG
DLRTRAARGPQTTAVPGVIALRLPYRAPLNPSNLFGHLAATAVPGVEEWRDGAYRRTLTL
PYGHGVVALTPKPDHIACRLSLTDPRDLTRAISRCRWLLDLDADPVAVDAQLRTDPLLAP
LVDAGPGRRVPRTVDGAEFAVRAVLGQQVSTAAARTHAARLVTAHGVPVGDPEGGLTHLF
PTPEALAGLDPEALALPRTRRTTLTTLVAALAEDRLRLDTGTDWERARAELAALPGFGPW
TVESIAMRSLGDPDAFLPTDLGIRRAAERLGLRATPAALTARAADWRPWRAYAVQYLWTV
DDHPINHLPA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgcgtgcgggccgtccagtcgaaggacgcccgcttcgac
ggctggttcttcaccgcggtcctcaccacgcggatctactgccgtcccagctgccccgtc
gtgccgcccaagacccgcaacatgaccttctacccgagcgccgccgcctgccagcaggcc
ggattccgggcctgcaagcggtgccgccccgacaccagccccggatccccggagtggaac
gcccgcgccgactcggtcgcccgcgcgatgcgtctcatccaggacggggtcgtcgaccgc
gagggcgtgcccgggctcgccgcccggctcggctactccgcccgccagatcgaacgccag
ctgctggccgagctgggcgccggacccctggccctggcccgcgcccagcgggcacagacc
gcccgcctcctcatcgagacgaccgaactgccgatggcccaggtggcgttcgccgccggt
ttcgcctcgatccgcactttcaacgagacggtccgcgaggtcttcgccctggcccccggc
gatctgcgcacccgcgccgcccggggcccgcagaccaccgccgtacccggcgtcatcgca
ctgcgcctgccgtaccgggccccgctcaaccccagcaacctcttcggccacctcgccgcg
accgcggtccccggcgtcgaggagtggcgcgacggcgcgtaccggcgcacgctgaccctc
ccgtacgggcacggcgtcgtcgccctgaccccgaaacccgaccacatcgcctgccggctc
tccctcaccgacccccgcgacctcacccgggccatcagccgctgccgctggctcctcgac
ctggacgcggacccggtcgccgtcgacgcccagctgcgcaccgacccgctgctggccccg
ctggtcgacgcgggccccggccgccgggtgccgcgcaccgtggacggcgcggagttcgcc
gtacgcgcggtgctcggccagcaggtctccaccgccgccgcccgcacccacgcggcccgg
ctggtcaccgcccacggtgtcccggtcggcgaccccgagggcgggctcacccacctgttc
ccgacccccgaggcactggcggggctcgacccggaggccctcgcgctgccgcgcacccgc
cgcacgaccctcaccacactcgtcgcagccctcgcggaggaccggctgcggctcgacacc
ggcaccgactgggagcgggcccgcgccgaactggccgcgctgcccggcttcggcccctgg
acggtcgagtccatcgccatgcggtccctcggcgaccccgacgccttcctccccaccgac
ctgggcatccgccgcgccgccgaacggctcggcctgcgggccacccccgccgccctcacc
gcacgggccgccgactggcgcccctggcgggcgtacgccgtgcagtacctctggacggtg
gacgaccaccccatcaaccacctgcccgcctga
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