Streptomyces parvus: ABXI76_07850
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Entry
ABXI76_07850 CDS
T10675
Name
(GenBank) TerD family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spaz Streptomyces parvus
Pathway
spaz03030
DNA replication
spaz03430
Mismatch repair
spaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABXI76_07850
03430 Mismatch repair
ABXI76_07850
03440 Homologous recombination
ABXI76_07850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spaz03032
]
ABXI76_07850
03400 DNA repair and recombination proteins [BR:
spaz03400
]
ABXI76_07850
Enzymes [BR:
spaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABXI76_07850
DNA replication proteins [BR:
spaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABXI76_07850
DNA repair and recombination proteins [BR:
spaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABXI76_07850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XCM29310
LinkDB
All DBs
Position
complement(1850307..1852268)
Genome browser
AA seq
653 aa
AA seq
DB search
MSLVSASFNTSAMGDYGYDWALVDVETSGLVARRDRVLSVAVITIGPDGEQTGEFSTLLD
PGCDPGPVEVHGLTAERLRGAPTFDQVAGRIGAMLQDRVLVAHNAQFDYDFLAHEFARAR
MWLPVSQRLCTLALNRQVDPPTDDMKLGTLATHYNVPQQRAHDALDDTRVLAGILRASLR
EAARLDLPLPLVTCPPRAESQFTPKPPKTPCAYRNPGRLTADGPLRQGMKVAITGETAHA
RAELVGRAVAAGLNMMTSVSRHTSVLVTNEPASGSAKVRRALAEGVPVIDEHAFLRMLAD
VRPGTAHEATAVAAVPMAEPEAEPVVVTADLAPRTPSAAPVREAPVREAPVREAPVPGAP
ALPTAAPGVPVPAPRRPAPSAGAPDKPLAGRRVLVLGGVHADAAAARTRIVELGGSAAIN
LSASVTDVVLLEKGEGDRRMSRIATLELPVHDIHWLSAPTAIATAASGTAPRAQEPHVMP
RGGVIDLPTAHGGPAPEWYVTAGWAPQPDCGIDVVAFLLDEDQQVTFDEDFIFYGAPESP
AGTVRLLTGGPAEQTIALDLASLPPATRKVVVAAAVDGAATFGTVGAIQIGAALGSSGAP
LARATLDAATTERTMLLVEIYRRGPVWRLRAVGQGYDHGLDALARGYGVDIAD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgtctccgcctccttcaacacgtccgccatgggcgactacggctacgactgg
gccctggtcgacgtggagacctcgggtctcgtggcccggcgggaccgtgtgctgtccgtc
gcggtgatcacgatcggtccggacggcgagcagaccggggagttctcgacgttgctcgat
ccgggctgcgatccggggccggtggaggtgcacgggctgaccgccgagcggctgcgcggt
gcgccgacgttcgatcaggtcgccgggcggatcggggcgatgcttcaggaccgggtcctg
gtcgcccacaacgcccagttcgactacgacttcctggcccatgagttcgcccgcgcgcgg
atgtggctgccggtctcgcagcggctgtgcaccctggcgctgaaccgtcaggtggatccg
ccgacggacgacatgaagctcggcaccctcgccacccactacaacgtcccccaacagcgc
gcacacgatgccctggacgacacccgtgtgctcgccggcatcctgcgggcgtccctgcgc
gaggcggcgcggctcgatctgcccctgccactggtgacctgtccgccccgggcggagtcg
cagttcacgccgaagccgccgaagaccccctgtgcctaccgcaatccgggacggctgacc
gccgacgggccgctccggcaggggatgaaggtcgcgatcaccggtgagaccgcccacgcc
cgggcggagctcgtggggcgggcggtcgccgccgggctgaacatgatgacctccgtcagc
cggcacaccagcgtgctggtcaccaacgaaccggcgtccggttcggcgaaggtccgacgc
gcactcgccgagggtgtaccggtcatcgacgagcacgccttcctgcgcatgctggccgac
gtacggccggggaccgcgcatgaggcgacggccgtcgcggccgtcccgatggccgagccg
gaagcagaacccgtcgttgtcaccgccgacctggcgccccgtacgccgtctgccgcaccc
gttcgggaagcacccgttcgggaagcacccgtccgggaagcacccgtcccgggcgcaccg
gccctccccacggccgcgcccggggtgccggtacccgcgccacggcggccggcgccgtcc
gccggcgccccggacaagcctctggccgggcgtcgcgtgctggtgctcggtggcgtccac
gccgatgccgcggcggcacgtacccgcatcgtcgaactgggcgggtccgcggcgatcaac
ctgtccgcaagcgtcaccgacgtcgtgctcctggagaagggggagggtgaccggcgcatg
agccgcatcgccacccttgagctccccgtgcatgacatccactggctcagcgccccgacc
gccatcgccaccgccgcgtccgggacggcgccgagggctcaggaaccgcacgtgatgccc
agaggcggtgtcatcgacctgcccactgcgcacggcgggccggcgccggagtggtacgtc
accgcaggctgggccccgcagccggactgtgggatcgacgtcgtcgcgttcctcctcgac
gaggaccaacaggtcaccttcgacgaggacttcatcttctacggggcgcccgaaagcccg
gccgggaccgtgcggctgctgaccggcggtcccgccgaacagaccatcgccctcgacctg
gcctccctgccgccggcgacgcgcaaggtcgtcgtcgccgcggccgtcgacggcgcagcc
accttcgggacggtcggcgcgatccagatcggagcggccctgggcagcagcggtgcaccg
ctggccagggccacgctggacgccgccaccaccgaacgcaccatgctcctcgtggagatc
taccgcagaggtccggtgtggcgcctgcgtgctgtcgggcagggctacgaccacggcctc
gacgccctcgcacgcggatacggtgtcgacatcgccgactga
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