Streptomyces parvus: ABXI76_08150
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Entry
ABXI76_08150 CDS
T10675
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
spaz Streptomyces parvus
Pathway
spaz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spaz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABXI76_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spaz03021
]
ABXI76_08150
Transcription machinery [BR:
spaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABXI76_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
FAM199X
Motif
Other DBs
NCBI-ProteinID:
XCM29362
LinkDB
All DBs
Position
complement(1919821..1921368)
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AA seq
515 aa
AA seq
DB search
MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILEEEGVTLMVSAAESPKRARKSVAAKSPVKRAATKTVAAKTTVTRTVAATAAPAAESAD
AVADDTVAAAPAKKAAAKKTAAKKTAVKKTAAKKTAAKKSGKQDDELLDGDEPVEEVKAG
KGEEEEGEGENKGFVLSDDDEDDAPAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEVEL
AKRIEAGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGR
GMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMV
EVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDS
EFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIG
KVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgaatctgtgatg
gcgctcatcgagcggggaaaggctgatgggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaacgttctgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagtcgccgaagcgcgcc
cgcaagagcgtcgcagcgaagagcccggtcaagcgcgccgccaccaagactgtcgcggcg
aagaccaccgtgaccaggaccgtcgcggccaccgccgccccggcggccgagagtgcggac
gcggtggccgacgacaccgtcgcggccgctcccgcgaagaaggcggcagccaagaagacc
gccgccaagaagacagccgtgaagaagacggcggccaagaagaccgccgcgaagaagtcc
ggcaagcaggacgacgagctcctcgacggcgacgagccggtcgaggaggtcaaggccggc
aagggcgaggaagaggagggcgagggcgagaacaagggcttcgtcctctccgacgacgac
gaggacgacgcacctgcccagcaggtcgccgtcgccggcgccaccgccgacccggtcaag
gactacctgaagcagatcggcaaggtccccctcctcaacgccgagcaggaggtcgagctc
gccaagcgcatcgaggccggtctcttcgcagaggacaagctggcgaacgccgacaagctc
gccccgaagctcaagcgcgagctggagatcatcgccgaggacggccgccgggccaagaac
cacctcctggaggccaacctccgtctggtggtctccctggccaagcgctacaccggccgc
ggcatgctcttcctggacctgatccaggaaggcaacctcggtctgatccgcgcggtcgag
aagttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccgtcag
gcgatcacccgcgcgatggccgaccaggcccgcaccatccgtatcccggtgcacatggtc
gaggtcatcaacaagctggcgcgtgtgcagcgccagatgctccaggacctgggccgcgag
cccaccccggaggagctggccaaggaactcgacatgacccccgagaaggtcatcgaggtc
cagaagtacggtcgcgagccgatctccctgcacaccccgctcggcgaggacggcgacagc
gagttcggtgacctcatcgaggactccgaggccgtcgtcccggcggacgcggtcagcttc
acgctcctccaggagcagctccactcggtgctcgacacgctctccgagcgtgaggccggc
gtggtctcgatgcgcttcggtctcaccgacggtcagccgaagacgctcgacgagatcggc
aaggtctacggcgtgacgcgtgagcgcatccgtcagatcgagtcgaagacgatgtcgaag
ctccggcatccgtcgcgctcccaggtgctccgcgactacctggactag
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