Streptomyces parvus: ABXI76_08475
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Entry
ABXI76_08475 CDS
T10675
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spaz Streptomyces parvus
Brite
KEGG Orthology (KO) [BR:
spaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaz03009
]
ABXI76_08475 (rimO)
Enzymes [BR:
spaz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABXI76_08475 (rimO)
Ribosome biogenesis [BR:
spaz03009
]
Prokaryotic type
ribosomal protein modification factors
ABXI76_08475 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
XCM29418
LinkDB
All DBs
Position
complement(1994967..1996448)
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AA seq
493 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWDLVEDASDADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQDAAVALPGHAQETPAPAPEDLPEGVAPVSGPRAPL
RRRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLQETRWLAEQGVKEVMLV
SENNTSYGKDLGDIRLLETLLPELADVDGIERIRVSYLQPAEMRPGLIDVLTSTPKVAPY
FDLSFQHSSPSVLRTMRRFGDTDRFLELLDTIRSKAPQAGARSNFIVGFPGETEADLAEL
ERFLTGARLDAIGVFGYSDEEGTEAVGYENKLDADTIAERLAHISQLAEELTSQRAEERV
GETLQVLVESIESDEDGEVAIGRAAHQAPETDGQVVFTTREGLVPGRMVEAKAVGTEGVD
LVAEHHELAEAAR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagcttgcaggccgcttggcagcggacggctgggacctcgtcgaggacgcctcg
gacgcggatgtcgcagtcgtcaacacctgtgggttcgtcgaagccgccaagaaggactcc
gtcgacgccctgctcgaagccaacgatctcaaggaccacggccgcacccaggccgtcgtc
gccgtcggctgcatggccgagcgctacggcaaggacctcgccgaggccctgcccgaggcg
gacggcgtcctcggattcgacgactacgccgacatctccgaccggctccagaccatcctc
aacggcggcatccacgcctcgcacaccccgcgcgaccgccgcaagctcctgccgatcagc
cccgccgagcggcaggacgccgccgtggcgctgcccggccacgcccaggagacgcccgcc
ccggcccccgaggacctccccgaaggcgtcgccccggtctccgggccgcgggcaccgctg
cgccgccggctcggcaccagccccgtcgcctcggtcaagctcgcctccggctgcgaccgc
cgctgctccttctgcgccatcccctccttccgcggctccttcatctcgcggcggccctcg
gacgtgctccaggagacccgctggctggccgagcagggcgtcaaggaggtcatgctcgtc
tccgagaacaacacctcctacggcaaggacctcggcgacatccgcctcctggagaccctg
ctgcccgagctggccgacgtggacggcatcgagcggatccgggtcagctacctccagcct
gccgagatgcgccccggcctcatcgacgtcctcacctcgacgccgaaggtcgccccgtac
ttcgacctctccttccagcactcctccccgagcgtgctgcgcacgatgcgccgcttcggc
gacaccgaccgcttcctggagctcctcgacaccatccggagcaaggcgccccaggccgga
gcccgctccaacttcatcgtcggattccccggcgagaccgaggcggacctcgccgagctg
gaacgcttcctcaccggcgcccgcctcgacgcgatcggcgtcttcggctactccgacgag
gagggcaccgaggcggtcggctacgagaacaagctggacgccgacaccatcgcggaacgc
ctcgcccacatctcccagctcgccgaggagctgacctcgcagcgggccgaggagcgcgtc
ggcgagaccctccaggtgctcgtggagtccatcgagtcggacgaggacggcgaggtcgcg
atcgggcgcgcggcccaccaggcccccgaaacggacggccaggtggtcttcaccacacgc
gagggactcgtgccgggccgtatggtcgaggcaaaggcagtgggcaccgagggcgtcgac
ctggtggccgaacaccacgagcttgcggaggcagccagatga
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