Streptomyces parvus: ABXI76_19405
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Entry
ABXI76_19405 CDS
T10675
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
spaz Streptomyces parvus
Brite
Enzymes [BR:
spaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ABXI76_19405 (hrpA)
Messenger RNA biogenesis [BR:
spaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ABXI76_19405 (hrpA)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCM31240
LinkDB
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Position
complement(4401800..4405741)
Genome browser
AA seq
1313 aa
AA seq
DB search
MSTSFADLQSQLGQLSLRDANRLGRRLEGARRIRKPEARQSVLDEIAAEAGKAADRLAAR
AARLPALSYPEELPVSQKKDEILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGVRGM
IGHTQPRRIAARTVAERVADELKTPLGETVGWKVRFTDQVNPESTYLKLMTDGILLAEIQ
TDRELLAYDTIIIDEAHERSLNIDFLLGYLARLLPRRPDLKVVITSATIDPERFARHFGD
APIVEVSGRTYPVEVRYRPLLEGADEDTADSDRDQITAICDAVDELGHEAPGDVLVFLSG
EREIRDTADALNKRNLRHTEVLPLYARLSHAEQHRVFQRHTGRRIVLATNVAETSLTVPG
IKYVIDPGNARISRYSHRTKVQRLPIERISQASANQRKGRCGRTSDGICIRLYSEDDFVT
RPEFTDPEILRTNLASVILQMTAAGLGDIEKFPFIDPPDHRNIRDGVQLLQELGALDPAE
KDPKKRLTPLGRKLSQLPVDPRLARMVIEADKNGCAREVMVIAAALSIQDPRERPAEKQT
QADQNHARFKDETSDFLAFLNLWAYVREQQKERGSSSFRRMCKQEYLNFLRIREWQDIYA
QLRTVAKQMGITVEEPKAEASIPEQAVHTSLLAGLLSHIGLKDTEKNEYLGARSAKFAIF
PGSALFKKQPRFLMSAELVETSRLWARVNAKVEPEWIEPLAQHLVKRTYSEPHWEKDQAA
VMAYERVTLYGVPIVAQRKVNFGRIDQEASRDLFIRNALVEGDWRTHHQFFHDNRKLLGE
VEELEHRARRRDILVDDETLFDFYDRRIPEHIVSGAHFDSWWKHKKREEPDALDFERSML
INEKAGAVTKDDYPDSWRQGKLKFKVTYQFEPGADADGVTVHVPLQVLNQVTAEGFDWQI
PGLREEVVTELIRSLPKPIRRHYVPAPNYADKFLDRAVPLQEPLPQTLARELQRMVGVPV
TADDFDLSRVPDHLKITFRIVDERRRKVAEDKDLEALKLKLRPKARQALSKAAAATAGPS
GESIERSGLTDWTIGTLNKVFETRRAGQPVKAYPALVDQGETVAVRLFDTEAEQQQAMWR
GTRRLIMLNIPVNPAKFASDRLSNQQKLALSRNPHGSVQALFEDCATAAADRLIAAHGGP
AWDEKAFRTLYDKVRADLVDLTVRTIDQVQQILAAWQACERRLKSTNSLALVANVTDVRE
QLARLVPPGFVTATGLRRLPDLMRYLVAADRRLQQMPTAVQRDTTRMEKVHEMQDEYAWL
LEQFPQGRPVPQEALDVRWMIEELRVSYFAHALGTAFPVSDKRIVKAIDALAP
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttccttcgccgatctccagtcccagctcggtcagctctcgctccgcgacgcg
aaccggctcggccggcgcctcgaaggagcgcgccgcatccgcaagcccgaggcccgccag
tccgtgctggacgagatcgcggccgaggcgggaaaggcggccgaccggctcgcggcgcgc
gcggcccggctgcccgccctgtcgtacccggaagagctgccggtcagccagaagaaggac
gagatcctggaggcgatacgcgaccaccaggtcgtgatcgtcgccggggagaccgggtcc
ggcaagaccacgcagctcccgaagatctgtatggagctgggacgcggcgtccggggcatg
atcgggcacacccagccccgccggatcgccgcccgtacggtcgcggagcgcgtcgcggac
gagctgaagacgccgttgggcgagacggtcggctggaaggtccgcttcaccgaccaggtg
aacccggagtcgacgtatctgaagctgatgacggacggcatcctgctcgccgagatccag
acggaccgcgagctgctggcgtacgacacgatcatcatcgacgaggcccacgagcggtcc
ctcaacatcgacttcctgctcggctatctggcccggctgctgccccgccgccccgatctg
aaggtcgtcatcacctccgcgacgatcgacccggagcggttcgcgcgccatttcggggac
gccccgatcgtggaggtcagcgggcggacgtatcccgtcgaagtccgctaccggccgctg
ctggagggggccgacgaagacacagcggactccgaccgggaccagatcaccgcgatctgc
gacgccgtcgacgagctgggccacgaggcccccggcgacgtcctggtcttcctctccggt
gagcgcgagatccgggacacggcggacgcgctgaacaagcgcaacctcagacataccgag
gtgctccccctctacgcgcgtctctcgcacgccgagcagcaccgcgtgttccagcgccac
accggacgccgcatcgtcctcgcgaccaacgtggccgagacctcgctgaccgtccccggc
atcaagtacgtgatcgacccgggcaacgcccgtatctcccgctacagccaccgcaccaag
gtccagcggctgccgatcgagcggatctcccaggccagcgccaaccagcgcaagggccgc
tgcggccgtacgtcggacggcatctgcatccggctgtactccgaggacgacttcgtcacc
cggccggagttcaccgacccggagatcctgcggaccaacctggcctccgtcatcctccag
atgaccgccgccgggctgggcgacatcgagaagttccccttcatcgacccgccggaccac
cgcaacatccgcgacggcgtgcagctcctccaggaactgggagcgctcgaccccgccgag
aaggatccgaagaagcggctcaccccgctcggccgcaagctctcccagctgcccgtcgac
ccgcgcctggcccgcatggtcatcgaggccgacaagaacggctgcgcccgcgaggtcatg
gtcatcgccgccgcgctctccatccaggacccgcgcgagcggccggcggagaagcagacg
caggccgaccagaaccacgcccggttcaaggacgagacctccgacttcctggccttcctc
aatctctgggcgtacgtccgcgagcagcagaaggagcgcggctcgtcctcgttccgccgg
atgtgcaagcaggagtatctgaacttcctgcgcatccgcgagtggcaggacatctacgcg
cagctgcggacggtcgccaagcagatgggcatcaccgtcgaggagcccaaggcggaggcg
tccattcccgagcaggcggtgcacacgtcgctgctggccgggctgctgtcgcacatcggg
ctgaaggacaccgagaagaacgagtatctgggcgcgcgcagcgccaagttcgcgatcttc
cccggctcggcgctgttcaagaagcagccccggttcctgatgtcggcggagctggtggag
acctcccggctctgggcgcgggtcaacgccaaggtcgagcccgagtggatcgagccgctg
gcccagcatctggtgaagcgcacctacagcgagcctcactgggagaaggaccaggcggcg
gtgatggcgtacgagcgggtcaccctctacggcgtgccgatcgtcgcccagcgcaaggtc
aatttcggacgtatcgaccaggaggcctcgcgggatctgttcatccgcaacgccctggtc
gagggcgactggcgcacccaccaccagttcttccacgacaaccgcaaactgctcggcgag
gtcgaggagttggagcaccgggcccggcgccgcgacatcctcgtggacgacgagacgctc
ttcgacttctacgaccggcggattcccgaacacatcgtgtccggggcgcacttcgactcc
tggtggaagcacaagaagcgcgaggagccggacgcgctcgacttcgagcgctccatgctg
atcaacgagaaggccggggccgtcaccaaggacgactacccggactcctggcggcagggg
aagctcaagttcaaggtgacgtaccagttcgagcccggcgcggacgcggacggtgtgacc
gtgcacgtgccgctccaggtgctgaaccaggtcaccgccgagggcttcgactggcagatc
ccggggctgcgcgaagaggtcgtcaccgagctgatccgctcgctgccgaagccgatccgc
cggcactacgtccccgcgccgaactacgccgacaagttcctggaccgggcggtcccgctc
caggagccgctgccgcagaccctggcgcgcgagctccagcggatggtcggggtcccggtc
acggcggacgacttcgacctctcccgggtcccggaccacctcaagatcacgttccggatc
gtcgacgagcggcggcggaaggtcgccgaggacaaggacctggaggcgctgaagctcaag
ctgcgccccaaggcccgccaggcgctctccaaggccgccgcggcgaccgcggggccctcg
ggcgagtccatcgagcgctcgggcctcacggactggacgatcggcacgctgaacaaggtc
ttcgagacccgcagggccggtcagccggtgaaggcgtatccggcgctggtcgaccagggc
gagaccgtggcggtgcggctcttcgacaccgaggccgagcagcagcaggcgatgtggcgc
ggcacccggcggctgatcatgctgaacatcccggtgaacccggcgaagttcgcgtcggac
cggctgagcaatcagcagaagctggcgctgtcccgtaacccgcacggttcggtgcaggcc
ctcttcgaggactgcgcgaccgccgcggccgaccggctgatcgccgcgcacggggggccc
gcgtgggacgagaaggcgttccggacgctgtacgacaaggtgcgcgcggacctggtggac
ctgaccgtccgcacgatcgaccaggtgcagcagatcctggccgcgtggcaggcgtgcgag
cgccggctgaagtcgacgaacagcctggcgctggtggccaacgtcacggacgtacgggag
cagctggcccgtctcgtaccgcccggtttcgttacggccaccgggctgcgccggctgccg
gacctgatgcgctacctcgtggcggcggaccggcggctccagcagatgccgacggccgtc
cagcgggacaccacgcggatggagaaggtccacgagatgcaggacgagtacgcgtggctg
ctcgaacagttcccgcaaggcaggccggtgccgcaggaggcactggacgtccgctggatg
atcgaggagctgcgggtgagctacttcgcccatgcgctggggaccgcgttccccgtctcg
gacaagcggatcgtgaaggcgatcgacgccctcgcaccctga
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