Streptomyces parvus: ABXI76_21445
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Entry
ABXI76_21445 CDS
T10675
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spaz Streptomyces parvus
Pathway
spaz00040
Pentose and glucuronate interconversions
spaz01100
Metabolic pathways
spaz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spaz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ABXI76_21445
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABXI76_21445
Enzymes [BR:
spaz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ABXI76_21445
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
XCM31582
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Position
4836116..4837456
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AA seq
446 aa
AA seq
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MPARTRHTRSAAVTLGCASLALALSVPAQAAPRPGSHGTGIERAVLPAGDGWAAAGGSTT
GGANAAPEHVYTVTDRAELVAAFEEAGDAPKIVRVAGTIHGNSDADGTPIGCEQYETDGY
TLEKYLAAYDPEVWGRDRVPEGPLEDARVASAKLQEAAVNVRVPSNTTLIGVGANPEIIG
ASLQVRDVSNVIVRNISFEDTYDCFPQWDPTDGSGGAWNSEYDNLVVYGSRNVWVDHNTF
SDGDRPDAGQPRYFGQLYQQHDGLFDIVRGADLVTVSWNVLKDHDKTMLIGNSDGAGATD
RGKLRVTLHHNLFKDVKERAPRVRFGQVDSYNNHFVATRGSSYGYSYGIGAESRLVAEHN
AFTLAGDVDRATVLKKWSEAPLTAENNFVNGRRTDLIAVHNAGVPGEQLTEGAGWTPELR
TTVHHPWAVPVLVGLKAGAGRVSALR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgcacgcgtcacacccggtccgcagccgtcaccctgggctgcgcctcgctg
gccctcgcgctgagcgtccccgcccaggccgccccccgcccgggttcccacggcaccggg
atcgagcgcgccgtactgcccgccggggacggctgggccgccgcgggagggtccaccaca
gggggcgcgaacgccgcacccgagcacgtctacacggtgaccgaccgggccgagctcgtc
gccgccttcgaggaggcgggcgacgcgcccaagatcgtcagagtcgccggcaccatccac
ggcaactccgacgccgacggcaccccgatcggctgcgagcagtacgagacggacggctac
accctggagaagtacctcgccgcctacgacccggaggtgtggggcagagaccgggttccc
gagggcccgctggaggacgcccgcgtggcctcggcgaagctccaggaggccgccgtgaac
gtccgggtcccgtccaacaccaccctgatcggggtcggggcgaaccccgagatcatcggt
gccagtctccaggtccgggacgtctccaacgtcatcgtccgcaacatctcgttcgaggac
acctacgactgctttccccagtgggaccccacggacggcagcgggggcgcctggaactcg
gagtacgacaacctcgtcgtgtacggctcccggaacgtctgggtcgaccacaacaccttc
agcgacggcgaccggcccgacgccggacagccccgctacttcggccagttgtaccagcag
cacgacggcctcttcgacatcgtgcgcggtgccgacctggtcaccgtgtcgtggaacgtc
ctcaaggaccacgacaagacgatgctcatcggcaacagcgacggcgccggcgcgaccgac
cgcggcaagctccgcgtgacgctccaccacaaccttttcaaggacgtcaaggaacgtgct
ccgcgcgtccgcttcggccaggtcgactcgtacaacaaccacttcgtcgccacgcgcggc
agttcctacggctactcgtacggcatcggcgccgagtcccgtctggtcgccgagcacaac
gcgttcacgctcgccggcgacgtggaccgggccaccgtcctgaagaagtggtcggaggcc
ccgctcaccgcggagaacaacttcgtcaacggacgcaggaccgacctgatcgccgtccac
aacgccggagttcccggcgagcagctcaccgagggtgcgggctggacccccgaactgcgc
acgacggtccaccacccctgggccgtccccgtgctggtcggcctcaaggccggggcgggc
agggtgtccgccctccgatga
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