Sphingopyxis sp. BSN-002: L7H23_01935
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Entry
L7H23_01935 CDS
T10439
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spbs Sphingopyxis sp. BSN-002
Pathway
spbs03420
Nucleotide excision repair
spbs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L7H23_01935
03430 Mismatch repair
L7H23_01935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spbs03400
]
L7H23_01935
Enzymes [BR:
spbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L7H23_01935
DNA repair and recombination proteins [BR:
spbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L7H23_01935
MMR (mismatch excision repair)
Other MMR factors
L7H23_01935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UKK84889
LinkDB
All DBs
Position
353629..355941
Genome browser
AA seq
770 aa
AA seq
DB search
MNHLPASTPDLTRPDPSDPPYLQGLNGPQRQAVLTTEGPVLMLAGAGTGKTAALTARLAH
IIATRRAWPSEILAVTFTNKAAREMRERIGRMIGDAVEGMPWLGTFHSIAAKMLRRHAEL
VGLQSNFTILDTDDQLRVLKQLIQAEGLDEKRWPARQLAGLIDKWKNRGLTPADLDVADK
EAYADGKGQHFYALYQARLKTLNACDFGDLLLHMLVILKTHRDVLEQYQQRFKYVLVDEY
QDTNASQYLWLRLLAQSRKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGATVIRLEQN
YRSTPQILAAASALIAQNSDRLGKTLWTDLDAGDKVRVVGVWDGPEEARRIGEELETLQH
RKVSLDRTAILVRAQFQTREFEDRFIAIGMPYRIVGGFRFYERAEIRDALAYLRLVQSSA
DDLAFERIVNVPKRGLGDKALARIHQFARIERAPLLHAASRITETDELTPQARRQLANFI
AQMRSWQGKANELSHPELTQLILDESGYTAMLQADRSAEAAGRLENLSELVRAMEEYESL
EAFLEHVSLVMDRDNDDQTETVTIMTIHAAKGLEFDHVFLAGWEDGVFPSQRSMDEGGTA
SLEEERRLAYVAITRARQRASIYHAANRRIYGQWMSSIPSRFIAEIPPEHVDSENSFGGG
QSLWRANWSAQGDPFAHVAERQPSRTMTRGPAWQRAVASSSTVTRAPAPSERGPAASVGA
KPRSDLAIGMRVFHEKFGYGEIVDIDGNKLDVEFDQAGSKKVLDGFVRAA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccacctccccgcctcgacgcccgatctgacccgccccgacccgtcggacccgccc
tatctgcagggcctcaacggcccgcagcggcaggccgtgctgacgaccgaaggtccggtg
ctgatgctcgcgggtgcgggcaccggcaagaccgcggcgctgaccgcccggctcgcgcat
atcatcgcgacccggcgcgcgtggccgtccgaaatcctcgccgtgacctttacgaacaag
gcggcgcgtgagatgcgcgaacgcatcgggcggatgattggcgatgcggtcgagggcatg
ccctggctcggcacctttcacagtatcgcggcgaagatgctccgccgtcatgccgagctt
gtggggttgcagagcaatttcacgattctcgataccgacgaccagctccgcgtcctcaag
caactcatccaggccgagggactcgacgagaaacgctggcctgcacgccagctcgccggg
ctcatcgacaagtggaagaaccgcgggctgacacccgccgatctcgatgtcgccgacaag
gaagcctatgccgatggcaaggggcagcatttctatgcgctctatcaggcgcgactgaag
acgctgaacgcgtgcgatttcggcgatctgctgctgcacatgctcgtcatcctgaagacg
catcgcgacgtgctcgagcagtatcagcagcgcttcaaatatgtgctggtcgacgaatat
caggacaccaacgccagccagtatctgtggctgcggctgctcgcccaatcccggaaaaat
atctgctgcgtcggcgacgacgaccagtcgatctattcatggcgcggcgccgaggtcgcg
aacatcctgcgcttcgaaaaggattttccgggggcgacggtgatccgcctcgaacagaat
taccgctcgacgccgcagatcctcgccgccgcatccgcgctgatcgcacagaacagcgac
cggctcggcaagacactgtggaccgatctcgatgccggcgacaaggtgcgcgtcgtcggg
gtatgggatggtcccgaggaggcgcggcggatcggcgaggaactggagactctccagcac
cgcaaggtcagcctcgatcgcaccgccatcctcgtccgcgcgcagttccagacgcgcgag
ttcgaagaccgcttcatcgcgatcggcatgccctaccgcatcgtcggcggcttccgcttc
tacgagcgcgccgaaatccgtgacgctctcgcttatctccgcctcgttcagtcgtccgcc
gacgacctcgctttcgaacggatcgtcaatgtcccgaagcgcggtctcggcgacaaggcg
ctcgcgcgtatccaccagttcgcgcggatcgagcgcgcgccgctactccatgccgcttcg
cggatcaccgaaaccgacgagttgaccccgcaggcgcgccgccagctcgcaaactttatc
gcccagatgcgcagctggcagggcaaggcgaacgagctgtcgcatcccgagctgacccag
ctgatcctcgacgagtcgggctataccgcgatgctgcaggccgatcgcagtgccgaagcg
gcggggcggctcgagaacctgtccgagctcgtccgcgcaatggaggaatatgagtcactc
gaagcctttctcgagcatgtcagcctcgtgatggaccgcgacaatgacgaccagaccgag
acggtgacgatcatgacgatccacgccgccaagggcctggagttcgaccatgtcttcctc
gcgggctgggaagacggcgtctttccgtcgcagcgatcgatggacgaaggcggcaccgcc
agcctcgaagaggaacgccgtctcgcctatgtcgcgatcacgcgcgcacgccagcgcgcg
agcatctatcacgccgcgaaccggcgtatctatggccagtggatgagcagcatcccgagc
cgcttcatcgcggaaatcccgcccgaacatgtcgacagcgaaaacagcttcggcggcggg
cagagcctgtggcgcgcgaactggtcggcgcagggcgatcccttcgcgcatgtcgccgaa
cgccagccatcgcgcaccatgacgcgtgggccggcgtggcagcgcgctgtcgcctcgtca
tcgaccgtcacgcgggcccccgcccccagcgaacgcggtccagccgcctcggtcggcgcc
aaaccccgctccgaccttgcgatcgggatgcgcgtgttccacgaaaagttcggctatggc
gagatcgtcgatatcgacggcaacaagctcgacgtcgagttcgatcaggctggcagcaag
aaggttctggacggcttcgtgcgagccgcctga
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