Sphingopyxis sp. BSN-002: L7H23_02180
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Entry
L7H23_02180 CDS
T10439
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spbs Sphingopyxis sp. BSN-002
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spbs03400
]
L7H23_02180
Enzymes [BR:
spbs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
L7H23_02180
DNA repair and recombination proteins [BR:
spbs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
L7H23_02180
Prokaryotic type
L7H23_02180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
Motif
Other DBs
NCBI-ProteinID:
UKK84935
LinkDB
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Position
complement(405084..406469)
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AA seq
461 aa
AA seq
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MIAPTIVWFRRDLRLSDQAALAAAAAAGPVVPVYILDDETPKHRAMGAASRWWLHHSLAS
LDESLREKGSRLILRRGKCDEQLADIARETGATQVHCLRHYEPWWRNAERAVAKQLDLVC
HDGNYLAPPGAVTTGSGGLYKIYTPFWRALKERMPPSAATNRPRKIEVPEKWPKSDSLVD
WDLLPSNPDWAKGFAAEWTPGEAGARERVTDFVDGAPDYDRRRNLPSEEGSSRLSPHLHF
GEVSPAHIWHRLADAGGSVDVFLSEVGWRDYAQNIILQFPDYGGRSAREGFDHMPWRTGR
QADDDLKRWQRGQTGYPIVDAGMRQLWATGWMHNRVRMIAASFLIKHLLIDWRQGEQWFW
DTLVDADYGNNSVNWQWVAGTGVDSNMFPRIMAPLTQSEKFEAADYIRDWVPELAHLDDR
AIHDPDEAGRRPDTYPAKIIGHREARARALAAYDVMKAHDN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgccgacgatcgtctggtttcgccgcgaccttcgcctgtcggatcaggccgcg
cttgcagcggccgcagcggcgggtccggtcgtcccggtctatatcctcgacgatgaaacg
ccgaagcatcgcgcaatgggcgcggcatcgcgctggtggctgcatcatagcctcgccagt
ctcgatgaaagcctgcgcgagaagggatcacggctgattctacgtcgcggcaaatgcgat
gaacaactggctgacatcgcaagggaaacgggcgcaacgcaggtgcattgcctccgccac
tatgagccgtggtggcgcaatgccgagcgtgcggtcgcaaagcaactcgatctcgtctgc
cacgacggtaattatctcgcgccgccgggggcggtgacgacgggcagcggcggactctac
aagatctacacgcccttctggcgcgcattgaaggaacggatgccgccttccgctgcaacc
aaccggcctcgcaagatcgaggtccccgaaaaatggccaaaatcggacagtctcgtcgac
tgggatctgctcccgtcgaacccggattgggccaagggcttcgccgccgaatggacgccg
ggcgaggcgggtgcccgcgaacgcgtcaccgatttcgtcgacggagcgcccgactatgac
aggcgccgcaatctgccgtcagaagagggaagttcgcgcctgtcgccgcacctgcatttc
ggggaagtgtcgcctgcccatatctggcaccgccttgcggatgctgggggctcggtcgac
gtctttctctccgaagtcggttggcgcgactatgcgcagaatatcatcctgcaatttccg
gattatggcggtcgaagcgcacgcgagggcttcgatcatatgccgtggcgcacgggaagg
caggctgacgacgacctgaaacgctggcagcgcggacagaccggctatccgatcgtcgat
gccgggatgcgccagctctgggcaaccggctggatgcacaatcgggtgcgcatgatagcg
gccagtttcctcatcaagcatctgctgattgattggcgccaaggcgaacaatggttctgg
gatacgctggtcgacgccgactatggcaacaacagcgtcaactggcagtgggtcgcgggg
accggcgtcgactcgaacatgttcccgcgcatcatggcgcccctgacgcagtcggagaag
ttcgaggcggcggactatattcgcgactgggtgcctgaactcgcccatctcgacgaccgg
gcaatccacgatcccgatgaggctggccggcggcccgatacctatcctgcgaaaatcatt
gggcatcgcgaggcccgcgcccgcgcgctcgcggcgtatgacgtcatgaaggcgcacgac
aactga
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