Sphingopyxis sp. BSN-002: L7H23_02210
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Entry
L7H23_02210 CDS
T10439
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
spbs Sphingopyxis sp. BSN-002
Pathway
spbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L7H23_02210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spbs03019
]
L7H23_02210
Messenger RNA biogenesis [BR:
spbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L7H23_02210
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
UKK84941
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Position
412470..412943
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AA seq
157 aa
AA seq
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MSDENLPYRPCAGVMLANRDGRIFVGQRLDSSSEAWQMPQGGIDPGEDAEEAAIRELGEE
TGVHGGLVEIIARSKTEHFYDLPDHLMGKMWGGKYRGQRQFWFLMRFMGEDSDVNIATKH
QEFRSWRWAELDELEKLIVPFKRQLYRAVVEEFRPLV
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgagaatctcccctaccgcccctgcgccggcgtgatgctggcgaaccgcgat
ggccgcatctttgtcggccagcgcctcgattcgtcttccgaagcctggcagatgccacag
ggcgggatcgaccccggcgaagatgccgaggaagcagcgatccgtgagctgggtgaggaa
accggcgtccacggcgggctggtcgagatcatcgcgcgcagcaagaccgagcatttctat
gacctgcccgaccatctgatgggcaagatgtggggcggcaaatatcgcggccagcgccag
ttctggttcctgatgcgcttcatgggcgaggacagcgacgtcaacatcgcaactaagcac
caggaattccggtcatggcgctgggccgagctcgacgagctggaaaagctcatcgtgccg
ttcaaacgccagctctatcgcgccgtggtcgaggaattccgcccgctcgtctga
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