Sphingopyxis sp. BSN-002: L7H23_02315
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Entry
L7H23_02315 CDS
T10439
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
spbs Sphingopyxis sp. BSN-002
Pathway
spbs00010
Glycolysis / Gluconeogenesis
spbs00020
Citrate cycle (TCA cycle)
spbs00260
Glycine, serine and threonine metabolism
spbs00280
Valine, leucine and isoleucine degradation
spbs00310
Lysine degradation
spbs00380
Tryptophan metabolism
spbs00620
Pyruvate metabolism
spbs00630
Glyoxylate and dicarboxylate metabolism
spbs00640
Propanoate metabolism
spbs00670
One carbon pool by folate
spbs00785
Lipoic acid metabolism
spbs01100
Metabolic pathways
spbs01110
Biosynthesis of secondary metabolites
spbs01120
Microbial metabolism in diverse environments
spbs01200
Carbon metabolism
spbs01210
2-Oxocarboxylic acid metabolism
spbs01240
Biosynthesis of cofactors
Module
spbs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spbs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spbs_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
spbs_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
L7H23_02315 (lpdA)
00020 Citrate cycle (TCA cycle)
L7H23_02315 (lpdA)
00620 Pyruvate metabolism
L7H23_02315 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
L7H23_02315 (lpdA)
00640 Propanoate metabolism
L7H23_02315 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
L7H23_02315 (lpdA)
00280 Valine, leucine and isoleucine degradation
L7H23_02315 (lpdA)
00310 Lysine degradation
L7H23_02315 (lpdA)
00380 Tryptophan metabolism
L7H23_02315 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
L7H23_02315 (lpdA)
00670 One carbon pool by folate
L7H23_02315 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spbs04147
]
L7H23_02315 (lpdA)
Enzymes [BR:
spbs01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
L7H23_02315 (lpdA)
Exosome [BR:
spbs04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
L7H23_02315 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
GIDA
FAD_oxidored
NAD_binding_8
HI0933_like
FAD_binding_3
AlaDh_PNT_C
Lys_Orn_oxgnase
2-Hacid_dh_C
Thi4
3HCDH_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
UKK84961
LinkDB
All DBs
Position
complement(430965..432359)
Genome browser
AA seq
464 aa
AA seq
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MADNYDLIVLGSGPGGYVAAIRAAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEIY
HYMQHAGDYGLIAQQISADIDAVVKRSRGVAKQLSQGVAFLMKKHKITVHMGEGKLTAPG
KLEVKGEKGTETLTAKNIIVATGARARDLPFAPADGKRIWTYRHALVPPEMPKKLLVIGS
GAIGIEFASFYSDMGAEVTVVEMLDRLVPVEDADVSAFLEKQLKKQGMTIYTGAGVEELK
ATATGVSAKIKGKDGKVESAEFSHAIVAIGIVPNTENIGLEALGVKTTKGHIDTDAMCRT
NVPGLWAIGDVTAPPWLAHKAMHESVISVEAIAGNHPHAMDPRNIPGCTYCRPQIASVGL
TEAKAKELGYEVKAGTFPFIGNGKAIALGESEGFTKTVFDAKTGELLGAHMIGAEVTELI
QGYTIGKTAELVEDDFIGTVFPHPTLSETMHEGVLAAFGRPLHI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacaactacgacctcatcgtcctcggctcgggccccggcggatatgtcgcggcg
atccgcgcggcgcagctcgggctgaagaccgcgatcgtcgagcgcgagaatctgggtggt
atctgcctcaactggggctgcattccgaccaaggcgctgctgcggtcggccgaaatctac
cattatatgcagcatgccggcgattatggcctgatcgcacagcagatcagcgccgatatc
gacgcggtggtaaagcgcagccgcggcgtcgcgaaacagctcagccagggcgtcgccttc
ctgatgaagaagcacaagatcaccgtccatatgggcgagggcaagctgactgcgccgggc
aagctcgaggtaaagggcgagaagggcaccgaaaccctgaccgcgaagaatatcatcgtc
gcgaccggcgcgcgcgcgcgcgacctgcccttcgcgcccgccgacggcaagcgcatctgg
acctatcgccacgcgctcgtcccgcccgaaatgccgaagaaattgctcgtcatcggctcg
ggcgcgatcgggattgagttcgcgagcttctacagcgacatgggcgccgaagtgaccgtc
gtcgaaatgctcgaccgcctcgttcccgtcgaggatgccgacgtgtcggccttccttgaa
aagcagctcaagaagcagggtatgacgatctacaccggcgccggggtcgaggagctgaag
gccaccgcgaccggcgtctcggcgaagatcaagggcaaggacggcaaagtcgaaagcgcc
gagttcagccacgcgatcgtcgcgatcggtatcgtcccgaacaccgagaatatcggcctc
gaagcgctcggcgtgaaaacgaccaagggccatatcgacaccgacgcgatgtgccgcacc
aacgtccccggcctgtgggcgatcggcgacgtcaccgcgccgccatggctcgcgcacaag
gcgatgcatgagtcggtgatttcggtcgaggcgatcgcgggcaatcatccgcacgcgatg
gacccgcgcaatatcccgggctgcacctattgccgcccgcagatcgccagcgtcggcctg
accgaagcgaaggccaaggaactcggctatgaggtcaaggccgggaccttccccttcatc
ggcaacggcaaggcgatcgcgctgggcgaatccgagggtttcaccaagaccgtgttcgac
gcgaagaccggcgaactgctcggcgcgcacatgatcggcgcggaggtcaccgaactgatc
cagggctatacgatcggcaagaccgccgagctggtcgaggatgatttcatcggcaccgtc
ttcccgcacccgacgctcagcgaaacgatgcacgagggcgtgctcgcggcattcggacgg
ccgctgcacatctga
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