Sphingopyxis sp. BSN-002: L7H23_02620
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Entry
L7H23_02620 CDS
T10439
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spbs Sphingopyxis sp. BSN-002
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spbs03009
]
L7H23_02620
Enzymes [BR:
spbs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
L7H23_02620
Ribosome biogenesis [BR:
spbs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L7H23_02620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
PSD5
Motif
Other DBs
NCBI-ProteinID:
UKK85020
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All DBs
Position
complement(499004..500203)
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AA seq
399 aa
AA seq
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MGEPALIERIAARGDGVTADGRHVAGAVPGDRVRDDGILIPGPNRTDPVCRHFGKCGGCE
LQHVAEPALADFVRDRVVGALEGQQISAGEVLPALLSPPESRRRATLTALRTGRQVALGF
NAAQSNQIVDMRMCPLLLPELFALVAPIRTLLETIAPQRRPVKVKLQILDQGAEVVLEGV
KAEGLDAAMALQDFAGEHRLARLEIDQGDGLETVWQPEPPSVRFGDIFVEVPPFAFLQAT
ATGQAALIDAVRNAIGDAPAVADLFAGVGTFALSVQAGRKVYAAEGARDAIAALTGAANR
ARALVATEHRDLFRRPLVPAELNRFGAVILDPPRAGAEEQVKQIADSTVPVIAYVSCNPA
SFARDAKILIAGGYQLDWVQPVGQFRWSTHVELAARFSR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaccagcgctgatcgagcgcatcgccgcgcgcggcgatggcgtgactgccgac
ggccgccatgtggcgggcgcggtgccgggcgatcgcgtccgcgatgacggcatcctgatc
cccggccccaaccgcaccgatcccgtctgccgtcacttcggcaaatgcggtggctgcgag
ctccagcatgtcgccgagcccgcgctcgccgacttcgtgcgcgaccgcgtcgtcggggcg
ctggagggccagcagatttcggctggcgaggtgctgccggcgcttctgtcgccgcccgag
agccgccgccgcgctacgctgaccgcgcttcgcaccggcaggcaggtcgcgctgggcttc
aacgcggcgcagagcaaccagatcgtcgacatgcgaatgtgtccgctgcttctacccgaa
ttgtttgcgctcgtcgcgccgatccggactttgctcgaaacgatcgcgccgcagcgccgc
ccggtaaaggtcaagctgcagatcctcgatcagggcgccgaagtggtcctcgaaggcgta
aaggccgaagggctcgacgccgcgatggcgctgcaggatttcgccggcgaacaccgactg
gcgcggctcgagatcgatcagggcgatgggctggaaaccgtgtggcagcccgagccgccg
tccgtgcgcttcggcgatattttcgtcgaggtgccgccctttgcgtttcttcaggcgacg
gcgacggggcaggcggcgctgatcgacgctgtgcgcaacgcgatcggcgatgcgcccgcc
gtcgccgacctgttcgcgggcgtcggcacctttgcgctatctgtgcaggctgggcgcaag
gtctatgcggccgagggcgcgcgcgatgcgatcgcggcgctgaccggggcagcgaaccgc
gcgcgggcgctggtcgcgaccgagcatcgcgatctgttccggcggccgctggttccggct
gagctcaaccgcttcggagcggtcatcctcgacccgccgcgtgcgggagccgaggagcag
gtgaagcagattgcggactctacggtgccggtaatcgcctatgtcagctgcaatcccgca
agcttcgcccgcgatgcgaaaatcctcatcgcgggcggctatcagctcgactgggtgcag
cccgtcggccagttccgctggtcgacccatgtggaactggccgcgcggttttcccgctag
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