Sphingopyxis sp. BSN-002: L7H23_03770
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Entry
L7H23_03770 CDS
T10439
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
spbs Sphingopyxis sp. BSN-002
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spbs02000
]
L7H23_03770
Transporters [BR:
spbs02000
]
Other transporters
Pores ion channels [TC:
1
]
L7H23_03770
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
GEO12453p1-like
CBM_4_9
Motif
Other DBs
NCBI-ProteinID:
UKK85242
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Position
753378..755342
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AA seq
654 aa
AA seq
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MKTRILTSTLSLIAVAAATPAFAQESVTGSEDSTITVIGAPLAADESNASVSVIDGTDIR
RAQNGSVSDQLVRLPGVSFNQNGTLGGVTNIRIRGAEAEQTLVLIDGVRVGDPSSPGGGF
DFANLMLGNIDRVEVLRGANSLPWGSHAIGGVVAVTTTNAGAAEAGATSGQIGAEYGARD
TVRANGQLRTSLGASQFGIGGGYTRTDGISSAAVGTERDGYRQYSLNLTNRTEIGNTLVF
RAFGLYADSRVDLDGFSFSPPYGLIDTNEFQKTREHYAAATIEHRPGGNDSTTGFSHKLQ
FGFADVNRDNYNPDFGTAPSFTARGRNERLSYSIDWAAIAQLRVLAGAEREWTHAFTDDG
FAADNGKTATTSFWGMLVGKPTETLSLTAGIRHDDHRDFGGATTLAFDAGQKIGDLVTIR
ASYREGFKAPTLFQLSDSAGAYGNPDLAPERARSYEIGLRFGDGQQWFLDVAAFRRNSRN
LIDFVTCPTTPNPLPAICATGNRPFGTYDNILRARGEGFEVEGGAKIGEQLELNANYTLL
SVKDRTPGGFYEGNRLARRPRHLANAELAWTPGGALDGADLSVAVRYAGKSFDDRFNSVE
LDDYVLVDLRASYPVYAGIELFGRVENLFDEDYQTAAGYGTAGRSAYVGVRWGF
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccgtattttgacatccaccctgtcgctcatcgccgtcgcggcggcgacaccc
gctttcgcacaggaaagcgtgaccggcagcgaagacagcacaatcaccgtcatcggtgcg
ccgctggctgccgatgaaagcaacgcctcggtctcggtgatcgatggcaccgacatccgc
cgcgcccagaatggttcggtcagtgaccagctcgtccgcctgcccggcgtcagcttcaac
cagaatggcaccctcggcggtgtgaccaacatccgcatccgcggggccgaagccgagcag
acgctcgtcctgatcgacggcgtccgcgtcggcgacccctcgtcgcccggcggcggcttc
gatttcgccaatctgatgctcggcaacatcgaccgcgtcgaggtgctgcgcggcgcgaac
agcctgccgtggggcagccacgcgatcggcggtgtggtcgcagtgacgaccaccaatgca
ggcgcagccgaagcgggcgcgacaagcggccagatcggcgccgaatatggcgcgcgcgac
acggtgcgcgcgaacggtcaactccgcacctcgctcggtgcctcgcaattcggcatcggt
ggcggctacacccgcaccgacgggatcagcagcgcggccgtcggcaccgagcgtgacggc
tatcgccaatattcgctgaacctcaccaaccgcaccgagatcggcaacacgctcgtcttc
cgcgccttcggcctctatgccgacagccgcgtcgacctcgacggcttcagcttttcgccg
ccctatggtctgatcgacaccaacgagttccagaagacgcgcgaacattatgccgcggca
acgatcgagcatcgtcccggcggcaacgacagcacgaccggcttctcgcacaagctccag
ttcggtttcgccgacgtcaatcgtgacaactacaatcccgatttcggcaccgcacccagc
ttcaccgcgcgcggccgcaacgaacggctgagctacagcatcgactgggccgccatcgcg
cagcttcgcgtcctcgcgggcgccgagcgcgaatggacgcacgccttcaccgacgacggc
ttcgcggcggacaatggcaagaccgcgacgacgtccttctggggcatgctcgtcggcaag
ccgaccgagacgctgtcgctcaccgcgggcatccgccacgacgatcaccgcgatttcggc
ggcgccacaacgctggcgttcgacgcagggcagaagatcggagatctcgtcacgatccgc
gccagctatcgcgaaggcttcaaggccccgaccctgttccagctctccgacagcgcgggc
gcctatggcaatcccgacctcgcgcccgaacgcgcgcgttcgtacgagatcggcctccgc
ttcggcgacgggcagcaatggttcctcgacgtcgcggctttccgccgtaacagccgcaat
ctcatcgatttcgtcacctgcccgacgaccccgaacccgctgcccgcgatctgcgccacc
ggcaaccgcccgttcggaacctatgacaatatcctccgcgcccgcggcgaagggttcgag
gtcgaaggcggcgcgaagatcggcgaacagctcgagctgaacgccaactatacgctgctg
tcggtcaaggatcgcaccccgggtggcttctatgaaggcaaccgcctcgcgcggcgtccg
aggcacctcgccaacgccgaactcgcgtggacgccgggcggcgcgctcgatggtgccgac
ctgtcggtcgcggtacgctatgcaggcaaaagcttcgacgaccgcttcaactcggtcgag
ctcgacgactatgtcctcgtcgacctgcgcgcgagctatccggtctatgccgggatcgag
ctgttcggccgcgtcgagaatctgttcgacgaggattatcagaccgccgccggctacggc
accgcgggccgctcggcctatgtcggggtccgctggggcttctga
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