Sphingopyxis sp. BSN-002: L7H23_04155
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Entry
L7H23_04155 CDS
T10439
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spbs Sphingopyxis sp. BSN-002
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spbs03032
]
L7H23_04155
03036 Chromosome and associated proteins [BR:
spbs03036
]
L7H23_04155
03400 DNA repair and recombination proteins [BR:
spbs03400
]
L7H23_04155
DNA replication proteins [BR:
spbs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L7H23_04155
Chromosome and associated proteins [BR:
spbs03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
L7H23_04155
DNA repair and recombination proteins [BR:
spbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
L7H23_04155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UKK85312
LinkDB
All DBs
Position
831435..831713
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQKIASENSDLRLEEVERIVDAFFDSIVDQLAAGGRVELRGFGAFSTRSRESRT
GRNPRTGTPVAVNAKKVPYFKPGKEMRERLND
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcggaactggtgcaaaaaatcgcgagtgaaaacagcgacttgcgccttgaa
gaagtagagcgaatcgtcgatgcgtttttcgattcgatcgtagaccaactcgcggcgggg
ggccgcgtcgaattgcgcggattcggagcattctcgacacgctcacgcgagtcgcgcacc
ggccgcaatccgcgtaccggcacgccggtcgcggtgaacgcgaaaaaagtcccttatttc
aagcccggaaaggaaatgcgcgagcgtctgaacgactga
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