Sphingopyxis sp. BSN-002: L7H23_05060
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Entry
L7H23_05060 CDS
T10439
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
spbs Sphingopyxis sp. BSN-002
Pathway
spbs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
L7H23_05060 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spbs01007
]
L7H23_05060 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spbs03016
]
L7H23_05060 (aspS)
03029 Mitochondrial biogenesis [BR:
spbs03029
]
L7H23_05060 (aspS)
Enzymes [BR:
spbs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
L7H23_05060 (aspS)
Amino acid related enzymes [BR:
spbs01007
]
Aminoacyl-tRNA synthetase
Class II (A)
L7H23_05060 (aspS)
Transfer RNA biogenesis [BR:
spbs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
L7H23_05060 (aspS)
Prokaryotic type
Other AARSs
L7H23_05060 (aspS)
Mitochondrial biogenesis [BR:
spbs03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
L7H23_05060 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UKK85479
LinkDB
All DBs
Position
complement(1003300..1005090)
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AA seq
596 aa
AA seq
DB search
MHAYRTHTCADLRAANVGEEVRLSGWVHRTREHANVLFVDLRDHYGITQIVVETGSDLYP
TVNAQGPESVLTFTGKVAARSPETLNPKLATGEIEIYPSAVTVQSSADRLPLPVFGETEY
PEEIRLTNRFLDLRRERLHKNIVLRSNVISSLRRRMIDQGFTEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE
MSFVTQDDVFNAIEPVLHGVFEEFADFDGKGRTVSPLPFQRIPYRESMLKYGSDKPDLRN
PLLVHDVGDFFKGSGFGRFATMVEEGQVVRAVAAPETHEKSRKFFDEMNSWAQSEGFPGL
GYATQKDGVFGGPIANNHGQEGMKAIADAMGLGPNDGIFFAAGVEAKAAKLAGLARTRVA
DQLNLIDKSRFEFCWIVDFPMFEADEDTGKIDFSHNPFSMPQGEMDALTNKDPLDILAYQ
YDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSQQDVDTNFAGMINAFKFGAPPHGGSAP
GVDRIVMLLADEPNIREVIVFPMTQKAEDLMMGAPAPVSEKQLKELSIRLVDGPKS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgtacccacacctgcgccgaccttcgcgccgccaacgtcggcgaggaa
gtccgcctctcgggctgggtgcaccggacgcgcgagcatgcgaatgtgctcttcgtcgat
cttcgcgaccattatggcatcacccagatcgtggtggagaccggttcggacctctatccg
acggtcaacgcgcaggggcccgagtccgttctgacgttcacgggcaaggttgcggcgcgc
tcgcccgagacgctgaacccgaagctcgcgaccggcgagatcgaaatctacccgagcgcg
gtgacggtgcagtcgtcggctgatcgcctgccgctgccggtgttcggcgagaccgaatat
cccgaggaaatccgcctcaccaaccgcttcctcgatctccgccgcgagcggctgcacaag
aatatcgtgctgcgctcgaacgtgatttcgtcgctgcgccgccggatgatcgatcaaggg
ttcaccgaattccagacgccgatcctgaccgcgagcagccccgagggcgcgcgcgactat
ctggttccgagccgcgtccaccccggtaaattctacgcgctgccgcaggcgccgcagatg
ttcaagcagctgctgatggtcgcgggcttcgaccgctatttccagatcgcgccctgcttc
cgcgacgaagatgcgcgcgccgaccgtagcccgggcgaattctaccagctcgatttcgag
atgagcttcgtcacgcaggacgatgtcttcaatgcgatcgaacccgtcctgcatggcgtg
ttcgaggaattcgccgatttcgacggcaagggtcgcaccgtctcgccgctgccgttccag
cgcattccctaccgcgaatcgatgctgaaatatggcagcgacaagcccgacctgcgcaac
ccgctgctcgtccatgacgtgggcgatttcttcaagggttcgggcttcggccgcttcgcg
acgatggtcgaggaagggcaggtcgtccgcgccgtcgccgcccccgaaacgcacgagaag
agccgcaaattcttcgacgaaatgaacagctgggcacagtcggaaggtttcccgggcctc
ggctatgcgacgcagaaggacggcgtgttcggcggcccgatcgccaacaaccatggtcag
gaaggcatgaaggcgatcgccgacgcgatgggtctcggcccgaacgacggcatcttcttc
gccgcgggcgtcgaggcaaaggccgcgaagctcgccggcctcgcgcgcacccgcgtcgcc
gatcagctcaaccttatcgacaagagtcgcttcgaattctgctggatcgtcgacttcccg
atgttcgaggccgacgaggacaccggcaagatcgatttcagccacaatcccttctcgatg
ccgcagggcgagatggacgcgctgacgaacaaggatccgctcgatatcctcgcctatcag
tatgacatcgtctgcaacggcgtcgaactgtcgtcgggcgcgatccggaaccaccgcccc
gacatcatgtacaaggcgttcgagatcgccggctacagccagcaggatgtcgatacgaac
ttcgccggcatgatcaatgccttcaaattcggcgcgccgccgcacggcggctcagcgccg
ggcgtcgaccgcatcgtgatgctgctcgccgacgaaccgaacatccgcgaagtgatcgtc
ttcccgatgacgcagaaggccgaggacctgatgatgggcgccccggcgccggtcagcgaa
aagcagctcaaggaactcagcatccggctcgtcgacggcccgaagagctaa
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