Sphingopyxis sp. BSN-002: L7H23_05065
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Entry
L7H23_05065 CDS
T10439
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spbs Sphingopyxis sp. BSN-002
Brite
Enzymes [BR:
spbs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
L7H23_05065 (rnd)
Transfer RNA biogenesis [BR:
spbs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L7H23_05065 (rnd)
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NCBI-ProteinID:
UKK85480
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Position
1005271..1006458
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AA seq
395 aa
AA seq
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MQVHPLIETSAALVEFVDLIKGSDFIAVDTEFMRENTFWPELCLIQVADSEHAAAIDPMA
PGIDMKPLLDLLVNNEDVLKVFHAGGQDVEIIFNLTGKTPHPIFDTQIGQMALGQAEQVG
YSNLVEAWIGIQLDKGARFTDWSRRPLDKRQIDYAIGDVTHLAKIFPMMLKKLVKTGRGH
WLDEEMEKLADPSNYNLDPDDAWQRIKVPSRKPDVLGRLQALAAWREREARSKNLPRGRI
VKDETLADLAAHPPKDQDGLGRVRGLSATWKSNDIGGRLMDALANAKNMAKDDMPDRAPR
GPGLGKEGVLVADLLKLLLKIRARELNVAARLIARSDDLEALAAGSRNDIPMMQGWRYDV
FGHAALDLVEGRMGFAVVNGKLVMSEIDAAAATEV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtccatccgctcatcgaaaccagcgcagcgctcgtcgaatttgtcgatctgatc
aaaggcagcgatttcatcgcggtcgataccgaattcatgcgcgaaaacaccttctggccc
gagctgtgcctgatccaggtggccgacagcgagcatgccgcggcgatcgatccgatggct
cccgggatcgacatgaaacccctgctcgacctgctggtgaacaatgaggatgtgctgaag
gtctttcatgccggcgggcaggatgtcgaaatcatcttcaacctgaccggcaagacgccg
catccgatcttcgacacgcagatcggccagatggcgctgggtcaggccgaacaggtcggc
tattcgaacctggtcgaggcgtggatcggtatccagctcgacaagggcgcgcgctttacc
gactggagccgccgcccgctcgacaagcgacagatcgactatgcgatcggcgacgtgacg
catctcgcgaagattttcccgatgatgctgaagaagctggtcaagacgggccgcggccac
tggctcgacgaggaaatggaaaagctcgccgatccgtcgaactataatctcgatcccgac
gacgcatggcagcggatcaaggtgccgtcgcgcaagcccgacgtgctcggccggctgcag
gcgctcgccgcgtggcgcgagcgcgaggcgcggagcaagaatctgccgcgcggccgcatc
gtcaaggacgagacgctcgccgatctcgccgcgcatccgccgaaggatcaggacgggctc
ggccgcgtccgcgggctgtcggcgacgtggaagtcgaacgacatcggcgggcggctgatg
gacgccctcgccaatgcgaagaatatggcgaaagacgacatgcccgaccgcgcgccgcgg
gggccggggctcggcaaggaaggcgtgctcgtcgccgacctgttgaagctgctcctcaag
atccgggcgcgcgagctcaatgtggcggcgcggctgatcgcgcggagcgacgatcttgag
gcgctggccgcggggtcacgcaacgatattccgatgatgcagggctggcgatacgacgtg
ttcggtcacgctgcgctcgatctggtcgagggccgcatgggctttgccgtcgtcaacggc
aagctggtgatgagcgagatcgacgcggccgccgcgaccgaagtctag
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