Sphingopyxis sp. BSN-002: L7H23_10620
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Entry
L7H23_10620 CDS
T10439
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spbs Sphingopyxis sp. BSN-002
Pathway
spbs03030
DNA replication
spbs03430
Mismatch repair
spbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L7H23_10620 (dnaQ)
03430 Mismatch repair
L7H23_10620 (dnaQ)
03440 Homologous recombination
L7H23_10620 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spbs03032
]
L7H23_10620 (dnaQ)
03400 DNA repair and recombination proteins [BR:
spbs03400
]
L7H23_10620 (dnaQ)
Enzymes [BR:
spbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L7H23_10620 (dnaQ)
DNA replication proteins [BR:
spbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L7H23_10620 (dnaQ)
DNA repair and recombination proteins [BR:
spbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L7H23_10620 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
DUF3131
Motif
Other DBs
NCBI-ProteinID:
UKK83024
LinkDB
All DBs
Position
complement(2149985..2150683)
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AA seq
232 aa
AA seq
DB search
MREIIFDTETTGFDPKSGDRLVEIGCVELVDRRETGVTFHAYFNPERDMPAAAEAVHGLS
IQFLSDKPLFATRVDELIEFLGDAPLVAHNAAFDFGFVNAELARAGRPALDMARMCCTVQ
MARKLHPGAKHSLDALCTRYGIDRSHRVKHGALLDAELLAHLYIEMTGGRQIGLGLAAAA
VGTTASVAADPVRTAPPRAFREPRPHGATPAELARHAEFVATLTGPLWHDSP
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagattattttcgataccgaaaccacggggttcgatcccaagtccggagacagg
ctggtcgaaatcgggtgcgtggaactggtcgatcgccgcgaaaccggggtcacattccac
gcctatttcaatcccgagcgcgacatgcccgccgccgccgaagcggtgcacggtctttcc
atccagtttctttcggacaagccactgttcgcgactcgcgtcgacgagctgatcgagttt
cttggtgacgcgccgctggtcgcgcataatgccgccttcgacttcggcttcgtcaacgcc
gaactcgcgcgcgctggccgcccggcgctcgacatggcgcgcatgtgctgcaccgtacag
atggcgcgcaagctgcatccgggcgccaaacacagcctcgacgcgctctgcacgcgctat
ggcatcgaccgcagccaccgcgtcaagcacggcgcgttgctcgatgccgaactgctcgcg
cacctttatatcgagatgaccggcggccggcagatcggcctggggcttgcggcggcagcc
gtcggcaccacggcttctgtcgctgccgatccggttcgtaccgcgcctccccgcgcgttc
cgcgaacctcgcccgcatggcgcaacgccggccgaactggcgcgccatgcagaattcgtc
gccacgcttaccgggccgctgtggcacgatagtccgtag
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