Sphingopyxis sp. BSN-002: L7H23_11340
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Entry
L7H23_11340 CDS
T10439
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
spbs Sphingopyxis sp. BSN-002
Pathway
spbs02020
Two-component system
spbs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L7H23_11340
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L7H23_11340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spbs03021
]
L7H23_11340
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spbs02035
]
L7H23_11340
Transcription machinery [BR:
spbs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L7H23_11340
Bacterial motility proteins [BR:
spbs02035
]
Flagellar system
Flagellar assembly proteins
Stator
L7H23_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UKK83162
LinkDB
All DBs
Position
complement(2302604..2303347)
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AA seq
247 aa
AA seq
DB search
MNIERPDQFGAGGRAPRLHGYGESAEALIAEYAPLVRKIAWQVHSRVSRTSDLEDMIQVG
LMALIEASRTYEERGFAFATYATTRIRGAMIDQQRREADVGRSAMAAARQIQQTRATLEQ
QLRRAPSASEMATALDMSAEDYFAFEKSATHGRSTSLDELVDEGSFLFADERIGAGEALE
QESLMEALRVCVTRLGEREQMVLQLYFFEELNLQEIGLALDVSAARVCQIKRDAMVKIDR
MMRDMTD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgagcgccccgaccagttcggagccggcggtcgcgcgccgcgcctgcatggc
tatggcgaaagcgccgaagcgctgatcgcggaatatgcgccgctcgtccggaagatcgca
tggcaggttcattcgcgcgtttcgcgcaccagcgacctcgaggatatgatccaggtcggt
ctgatggccctgatcgaggcgagccggacctatgaggaacgcggcttcgctttcgccacc
tacgccacgacccgcattcgcggggcgatgatcgaccagcagcggcgcgaagccgatgtc
ggccgatcggcgatggcggcggcgcgccagatccagcagacgcgcgcgacgctggaacag
caattgcgccgcgccccgtcggcatccgaaatggcgaccgcgctcgacatgtcggccgag
gattatttcgcgttcgagaagagcgcgacgcacggccgctcgacctcgctcgacgagctg
gtcgacgaggggagctttctctttgccgacgagcggatcggtgcgggcgaggcgctggaa
caggaaagcctgatggaagcgctgcgcgtctgcgtcacgcggctgggcgagcgcgagcag
atggtgctgcagctctatttcttcgaggaactgaatttgcaggagatcggcctggcgctc
gatgtcagtgcggcgcgtgtttgccagatcaagcgcgatgcgatggtcaagatcgatcgc
atgatgcgcgacatgactgactag
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