Sphingopyxis sp. BSN-002: L7H23_12380
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Entry
L7H23_12380 CDS
T10439
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spbs Sphingopyxis sp. BSN-002
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spbs02000
]
L7H23_12380
Transporters [BR:
spbs02000
]
Other transporters
Pores ion channels [TC:
1
]
L7H23_12380
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UKK83359
LinkDB
All DBs
Position
complement(2508841..2511204)
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AA seq
787 aa
AA seq
DB search
MVRTTLLAGLSTLALAITTNAAAQDASNDDYDGNAIIVTATKRDTSIQDIPFSINAQTAE
DIQKSGAVTLEDLSRNVAGLSVQNLGPGQSQVSVRGVSAGQVVRDQPGVKEQVGVYLDES
VISLSLFTPDIDLYDLNRVETLRGPQGTLFGSGSVGGTIRYITNQPKLGVTEGSVEANLN
LVDGDDIGGHLKGAVNIPMGDKAALRAVGYYTRYGGFINAIGPAGGNDVNSGERYGGRLA
LTFEPSDNFSITPRFVYQKVTADGFNRQDIYNLYGNQFTTTRPQVTYDEREQYLLLREGF
SDETLIADLNINVGLGGAKLTSVTSYINRDILVSRDASALTGSVSVDLGFPDAGVLLPSN
LVDTTDLETWTQEVRIASDNDSPFQWVLGAFYSKIDRVYTQTLPTPGYDAVTDATLGAGT
SAAVANGFGPNSPYNAFLPYDIKQFALFGEVSYDITDAFTATAGGRYYDFKETRSFVSGG
LFANGDNRTDSTKSSGFTPRFLLSYDVAKDVTINAQASKGFRLGGVNDPLNLPLCSPADA
ALFGGFQSYNDESLWNYELGVKSGGRGFTFNAAGFYNDIRNLQVTLDAGSCSSRIVFNVP
KAHSMGLEFELGLHPTDGLDFNLSGSIIEAEFDTTLPGALVTATGIRDGNRLPSVPKFQL
SASGSYEFPVTDTAKAYVSASFQHVGTRYTQPADQENNPRTFVHGLPFGGAPANASTTVD
LQLPDYQLVNLSAGVDFDNGLSLIAYVNNLFDENALLSFDRERGGRARLGYTVGQPRTFG
ITARKTF
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcacgaccctattggcggggctttctacgctcgcgctcgcaattaccaccaac
gctgcagcgcaagacgcatccaacgacgactatgacggcaacgccatcatcgtcaccgcg
accaagcgcgacaccagcattcaggatattcccttctcgatcaacgcgcagaccgccgag
gacatccagaaatcgggcgcggtgacgctcgaggatctctcgcgcaacgttgccggcctc
tcggtccagaatctcgggccggggcagagccaggtctcggtacgcggcgtctcggccggc
caggtcgttcgcgaccagccgggcgtcaaggaacaggtcggggtctatctcgacgaaagc
gtgatttcgctctcgctcttcacccccgacatcgacctttacgatctcaaccgcgttgaa
acgctacgcggcccgcagggcacgctcttcggctcgggctcggtcggcggcacgatccgc
tacattaccaaccagccgaagctcggcgtgaccgaaggcagcgtcgaggcgaacctcaac
ctcgtcgacggcgacgatatcgggggccacctcaagggcgcggtcaacattccgatgggc
gacaaggcggcgctgcgcgcggtgggctattacacgcgctatggcggcttcatcaacgcg
atcggcccggcgggcggcaacgacgtcaacagcggcgaacgctatggcggccgtctcgcg
ctgacctttgaaccctcggacaatttctcgatcacgccgcgcttcgtctatcagaaagtg
accgccgacgggttcaaccggcaggacatctacaatctctatggcaaccagttcacgacc
acccgcccgcaagtgacctatgacgagcgcgagcaatatctgttgctgcgcgagggcttc
agcgacgagacgctgatcgccgacctcaacatcaacgtcgggctcggcggtgccaagctc
acgtcggtgacctcgtacatcaaccgcgacatcctcgtcagccgcgatgcgagtgcactc
accggttcggtgtcggtcgacctcggcttccccgatgccggcgtgctgctaccgtcgaat
ctggtcgacacgaccgacctcgaaacctggacgcaggaagtccgcatcgcgtcggacaac
gacagcccgttccagtgggtgctcggcgccttctattcgaagatcgaccgcgtctatacc
cagacgctgccgacccccggatatgatgcggtgaccgatgcgacgctcggcgcgggaacg
tcggcggccgttgcgaacggctttggccccaattcgccgtacaatgccttcctgccatac
gacatcaagcagttcgcgctgttcggcgaggtcagctacgacatcaccgacgcgttcacc
gcgaccgcgggcggccgttattatgacttcaaggaaacgcgcagcttcgtctcgggcggg
ctgttcgccaatggcgacaaccgcaccgacagcaccaagtcgagcggctttaccccgcgc
ttcctgctgtcgtacgacgtcgccaaggacgtcacgatcaacgcgcaggcgtcgaagggc
ttccgcctcggcggggtcaacgatccgctcaacctgccgctctgctcaccggccgacgcc
gcattgttcggcggtttccagagctacaacgacgaatcgctgtggaactacgaactcggc
gtgaaatcgggcggccgcggcttcaccttcaacgcggccggtttctataacgacatccgc
aacctgcaggtgacgctcgacgccggcagttgctcgtcgcgcatcgtcttcaacgtgccg
aaggcgcattcgatggggctcgagttcgagctggggctgcacccgaccgacgggctcgac
ttcaacctgtcgggcagcatcatcgaggccgaattcgataccaccctgcccggcgcgctc
gtcaccgcgacgggtatccgcgacggcaaccggctgccttcggtgccgaagttccagctc
tcggcatcgggcagctatgaattcccggtcaccgacaccgccaaggcctatgtctcggca
tcgttccagcatgtcggcacgcgctacacgcagccggcggaccaggaaaacaacccgcgg
accttcgtccacggcctgcccttcggcggcgcgccggcgaacgcgtcgacgacggtcgat
ctgcagctgcccgactatcagctggtgaacctcagcgccggggtcgatttcgacaacggc
ctgtcgctgatcgcttacgtcaacaatctgttcgacgaaaatgcgctgctctcgttcgac
cgcgaacgcggcggccgcgcccgcctcggctacaccgtcgggcaaccgcggaccttcggg
atcacggcgcgcaagaccttctag
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