KEGG   Sphingopyxis sp. BSN-002: L7H23_15135
Entry
L7H23_15135       CDS       T10439                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
spbs  Sphingopyxis sp. BSN-002
Pathway
spbs03018  RNA degradation
Brite
Enzymes [BR:spbs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     L7H23_15135
Messenger RNA biogenesis [BR:spbs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     L7H23_15135
Ribosome biogenesis [BR:spbs03009]
 Prokaryotic type
  rRNA helicases
   L7H23_15135
SSDB
Other DBs
NCBI-ProteinID: UKK83890
LinkDB
Position
complement(3041812..3043680)
AA seq 622 aa
MPFENLSPVLSDALVARGYEALTPVQTHVTEDEAKGRDLLVSAQTGSGKTVAFGLAMADE
LIEDGRLPFASSPLALIVAPTRELALQVSRELSWLYGKAGARIATCVGGMDASRERRNLS
QGVHIVVGTPGRLRDHLERGALDLEALRVAVLDEADEMLDMGFREDLEEILDATPETRRT
LLFSATIPKPIAQLAKRYQRDALRISTVGEDRGHGDIAYQVVTVAPADIEGAVINLLRLH
EAETAMLFCATRDNVRRLHASLVERGFAAVALSGEHSQNERNHALQALRDRRARVCVATD
VAARGIDLPSLSLVVHVEIPRDAETLQHRSGRTGRAGKKGTAVLIVPYPRRRRVDGMLRG
AKIEAEWMNAPTAADVRQKDQERLIEKLLAPVEHEAEDLELAQRLMAERSAEDIAASLVR
AHRALMPPPEDLIDNGPPARRERGERGDRFERDDRPDRGQHREQFDDSVWFKLNIGRRQN
ADPRWILPLLCRRGHVTKHEIGAIRIGPSETLFNIPLAIADRFAEAIQRTANQDGEDDSG
VAITPAPGGATYPPRREKGPHKGGARHGGPRHDGPRHDGPRHDGPRGDGPRKPRGASTPG
GPTERYKPKPYGQRGPRKQGKY
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgcctttcgaaaatctctcgcccgtcctttcggacgccctcgtcgcgcgcggctatgaa
gcgctcacccccgtccagacgcacgtcaccgaagacgaagccaagggccgcgacctcctc
gtctcggcgcagaccggttcgggcaagaccgtcgccttcggcctcgccatggccgacgag
ctgatcgaggacggccgtctgcccttcgccagctcgccgctcgcgctgatcgtcgcgccg
acgcgcgagctcgcgctgcaggtcagccgcgaactgagctggctgtacggcaaggccggc
gcgcgcatcgcgacctgcgtcggcggcatggacgcaagccgcgaacgccgcaacctcagc
cagggcgtccacatcgtcgtcggcaccccgggacgcctgcgcgaccatctcgaacgcggt
gcgctcgaccttgaggcactgcgcgtcgccgtcctcgacgaggccgacgaaatgctcgac
atgggctttcgcgaagatcttgaggaaatcctcgacgcgacgcccgagacgcgccgcact
ttgctgttctcggcgacgatcccgaagccgatcgcccagctcgcgaagcgctatcagcgc
gatgcgctgcgcatctcgaccgtcggcgaagaccgcggccatggcgacatcgcctatcag
gtcgtgaccgtcgccccggccgatatcgagggcgccgtcatcaacctgctccgcctgcac
gaggccgagaccgcgatgctgttctgcgcgacgcgcgacaatgtccgccgcctccacgcc
agcctcgtcgagcgcggtttcgccgccgtcgcgctgtcaggcgagcatagccagaacgag
cgcaaccatgcgctgcaggcgctccgcgaccgccgcgcgcgcgtctgcgtcgcgaccgac
gtcgccgcgcgcggcatcgacctgccgagcctcagcctcgtcgtccatgtcgaaatcccg
cgcgacgccgaaacgctccagcaccgctcgggccgtaccggccgcgcgggcaagaagggc
accgcggtcctgatcgtcccctatccgcgccgtcgccgcgtcgacggcatgctgcgcggc
gcgaagatcgaggcggagtggatgaacgccccgaccgcggccgacgtccggcaaaaggat
caggagcggctgatcgaaaagctgctcgcccccgtcgagcatgaggctgaagacctcgaa
ctcgcgcagcgcctgatggccgagcgctcggccgaggatatcgccgcatcgctcgtccgc
gcgcaccgcgcgctgatgccgccccccgaagatctgatcgacaatggcccgcccgcgcgc
cgcgagcgcggcgagcggggcgaccgcttcgaacgcgatgatcgtcccgaccgcggccag
caccgcgagcagttcgacgacagcgtctggttcaaactgaacatcggccgccgccagaac
gccgacccgcgctggatcctgcctttgctctgccgccgcggccatgtgaccaagcacgag
atcggcgcgatccgcatcgggccgagcgaaaccctgttcaacatcccgctcgccatcgcc
gaccgcttcgccgaggccatccagcgcaccgccaatcaggatggcgaggacgacagcggc
gtcgcgatcactcccgcgcccggcggcgccacctatccgccgcgccgcgagaaaggtccg
cacaagggcggcgcgcgtcacggcggtccgcgccatgacggcccccgccacgacggtccg
cgtcatgacggcccgcgcggcgatggcccgcgcaagccgcgcggcgccagcacgcccggc
ggcccgaccgaacgctacaagcccaagccctatggccagcggggcccgcgcaagcagggc
aaatattga

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