Sphingopyxis sp. BSN-002: L7H23_15280
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Entry
L7H23_15280 CDS
T10439
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
spbs Sphingopyxis sp. BSN-002
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spbs03400
]
L7H23_15280 (radA)
DNA repair and recombination proteins [BR:
spbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L7H23_15280 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
AAA_16
AAA_30
Lon_C
AAA_24
Glyco_hydro2_C5
AAA_5
AAA
SLFN-g3_helicase
RecA
CobU
NTPase_1
nSTAND3
ATPase_2
AAA_14
AAA_29
ABC_tran
CbiA
Zn_ribbon_6
NACHT
NPHP3_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
UKK83918
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Position
3070249..3071610
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AA seq
453 aa
AA seq
DB search
MAKAKRQYVCQNCGSVSYRWQGQCADCNEWNTLVEEAGETAFSAKHDLSKGGRTLALETL
DEHSPMPERMLCGIAEFDRALGGGFVAGSATLIGGDPGIGKSTLLLQAAGRLAKSGKSVV
YISGEEAAGQVRLRAQRLGLGDAPVALASATSVRDILATLDSRTADFVVIDSIQTMHSDL
IDSAPGTVSQVRASAQELIRYAKDSGAAIVLVGHVTKDGTIAGPRVLEHMVDTVLAFEGE
RSHQYRILRAVKNRFGGTDEIGVFAMGEEGLGEVSNPSSLFLTDRSRDVPGSVVFPALEG
TRPVLVEVQALTVRLASGATPRRAVVGWDSGRLAMVLAVLEARCGLQMGGAEVYLNIAGG
YRLTDPAADLAVAAALISAFSERPVPSDAIVFGELSLSGEVRPVSHDALRLRESAKLGFS
KGWGPKGMKPVNGIGVNGFGRLGELVDLMLGRD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcgaagcgtcaatatgtctgccagaattgcggatcggtctcgtatcggtgg
caggggcaatgcgccgattgcaacgagtggaacacgctcgtcgaggaagcgggcgagacc
gccttttcggcgaagcacgacctcagcaagggcggccggacgctcgcgctcgaaacgctc
gacgaacatagtccgatgcccgaacggatgctgtgcggcatcgccgagttcgaccgcgcg
ctcggcggcggattcgtcgcgggatcggcgacgctgatcggcggcgatccggggatcggc
aagtcgaccttgctgctgcaggccgcggggcggctcgcgaaatcgggcaagtcggtcgtc
tatatcagcggcgaggaagcggcggggcaggtgcggctgcgggcgcagcggctggggctc
ggcgatgcgccggtcgcgctcgccagtgcgacctcggtgcgcgacatcctcgcgacgctc
gacagccggaccgccgatttcgtcgtgatcgattcgatccagaccatgcacagcgacctg
atcgacagcgcgcccggcacggtcagccaggttcgtgcgagcgcgcaggaactgatccgc
tatgccaaggacagcggcgcggcgattgtgctggtcgggcatgtcaccaaggacggaacg
atcgcaggaccgcgcgtcctcgaacatatggtcgataccgtgctggcgttcgagggcgag
cgcagccaccagtaccggatcctccgcgcggtgaagaaccgcttcggcggtaccgacgag
atcggcgtgttcgcgatgggcgaagaggggctgggcgaagtctccaacccgtcgagcctg
ttcctgaccgatcgcagccgcgacgtgccggggtcggtggtgttccctgcattggagggc
acgcgtccggtgctcgtcgaagtgcaggcgctcaccgtgcgcctcgcgagcggcgcgacg
ccgcggcgtgcggtcgtcggttgggacagcggccggcttgcgatggtgcttgcggtgctg
gaggcgcgctgcggactccagatgggcggcgccgaagtctatctcaacatcgcgggcggc
tatcggctgaccgatcccgcggccgatctcgcggtcgcggccgcactgatttcggcgttc
agcgagcggccggtgccgtccgacgcgatcgtctttggcgagctgtcgctttcgggcgag
gttcgtcccgtctcgcacgatgcactccgccttcgggagtccgcgaagctcggcttttca
aagggctgggggccgaagggtatgaagcctgtgaacgggatcggggtaaatggcttcgga
cgtctcggcgaactcgttgacctgatgctcggtcgcgactag
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