Sphingopyxis sp. BSN-002: L7H23_16235
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Entry
L7H23_16235 CDS
T10439
Name
(GenBank) YadA-like family protein
Organism
spbs Sphingopyxis sp. BSN-002
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
UKK84096
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All DBs
Position
3284765..3290509
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AA seq
1914 aa
AA seq
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MRYDLKRTHVAANVQRGFAGRLKVGGGLSWSVRRRIMQALRASVRVLGMRRKRRSLGPVH
PGSDTGRSVVGAAMASVALALVSPALATVVTETTAVDVGTQGSTCSIASASPTVASTWTC
EVPNGSGGFATISGVPSTPTGDPDLAWLNNWVSTNLPGANAIVLGTATTRASGANAIAIG
NAASAVGPSATAVGAYASATGNEALAFGAEAEADGIHSVAIGSQAQALNTNAIAIGRESD
ALGEYAVGIGSGAEARGNLGTAVGNNALARQGDTALGAGALDGTISSGSTVAVGYGAGQG
AGDVSRSTFVGAFAGAESQGTQNSFSGYFGGAAAIGNNNVAHGVAAGAAVTGDNNVSIGN
QAGTQAQIDSNGNPVGTLGSAYNRAVNIGQDTRGLADDAVAIGTDAAAVERAVAIGTDAS
ALGQDGVAVGASATSGATGYNVAIGAGGTSANANSTNEGAVAIGVSQFATGDGAVALGSY
NTATGDGSVAIGRVSFATGDGSLALGDSVTASGNRAVALGTTSSAMADSGVALGNGAKAD
SGDSAVAIGRIANASGAFAIAMGDSARASAEDALAFGSNAQSSGIGSIAVGLGSQVSGDQ
SIAIGVGHDVSGDRSGAFGDPTTITGNDSYAIGNDNVIDADQAFVLGNNVTIAAGTDRAV
SLGHNSNVTVADGVALGAGSIADTVVGTASATINGTTYNFAGAVPLSTVSVGSVGNERTI
TNLAAGRVSATSTDAINGSQLFATNQAVEASKTHYVSINDAGQILGSGNYNNDGATGLGA
IAIGTNASAQGTLSVAFGFQSRSVGRESISVGWNATSAGNSEIHIGTESGLGGVSTNVTN
IGIGIRTGQNVRGTANTAMGWQAGNQVTGDLNVALGRQSGMNVTGSFNTALGAYTGQNVT
GASNIALGNLAGNGITASDTVSIGSNSVAGAQNGDVALGRGSVTAVVAGTASSVNNGITY
NYAGIAPTSTVSIGNLGAERTITNVAAGRVSSTSTDAVNGSQLFATNTAVGNLAQSIAGG
MSSSSYVNPDGSVTTALNVGGTTYNNVQDALTQLNATAGAGWNISAQGANATNVAAGSAT
GSTVDFKSSDGNVVVSKDTANNDIEFALADDITVDSVTAGNTTVDTSGVSIAGGPNGTVS
LTGNGLDNGGNRITNVAAGTAATDAVNVGQLNAAVGSVNIGFAGNSGANITRSSGQVLVI
QGGGTTTGSYSGGNIRTVTDPGSGAINIEMAEAPKFGTVTVNDGGTGKITGVTAATLSST
STEAVNGSQLHATNQAVAAATQAANAGWNLTDANGNAANIGPDGNVVFEGDGNIRVTQTG
ADDDGKIEVALADDITVDSVTAGNTTLDTSGVSIAGGPSGTVSLTGSGLDNGGNRITNVA
AGVIGAASTDAVNGSQLFALGNSTASSLGGGSSYNPSTGQVVASLSVGGTTYNNVQDALT
QLNATAGAGWIISAQGANATNVAAGSATGSTVDFKSSDGNVVVSKGTASNDIEFALADDI
TVDSVTAGNTTVDTSGVSIAGGPNGTVSLTGNGLDNGGNRITNVAAGTAATDAVNVGQLN
AAVGSVNIGFAGNSGANITRSSGQVLVIQGGGTTTGSYSGGNIRTVTDPGSGAINIEMAE
APKFGTVTVNDGGTGKITGVTAATLSSTSTEAVNGSQLVALGDSIAASLSPGSTYNPATN
SITAQIVVGNNVYSNVQDALQAITVNGGGGGWTLASGVNGSGVVTGDASASIAPGATATF
VAGNNMTINQSGGALELALNPNLTGIQSIAITGGPTINGNGIDMGGDRITNVGAGVAPTD
AVNLGQMNAGLANTLGQANRYTDTAIADLRFDLTRYRRDANGGTAAAMAMSQVPQAFEPG
MGIAGIGMSTWQGEQAIAFGISKASDNGRVVVRATGSYNSRSEGGAAVGVGFQF
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatgatctgaaaaggacacacgtagccgccaatgtccagcgtgggtttgctggt
cggctgaaagtcgggggaggcctttcgtggtccgtccgtcgccgtatcatgcaggcgctg
cgtgcttctgttcgggtactggggatgcgccgcaagcgtcgtagcctgggtccggttcat
ccgggaagcgacaccggtcgctcggttgtcggcgccgcgatggcgtccgtggctctggcg
ctggtatcgccggctcttgcgaccgtcgtcacggagacgacggctgtcgatgtcggcaca
cagggctccacctgttccatcgcgtcggcatcccccactgtggcgtccacatggacgtgc
gaggtgccgaacggcagcggagggttcgcaacgatttccggggtgccgagcactccgacg
ggcgatccggatctggcctggctgaacaattgggtgtcgaccaatctgccgggtgcaaac
gcaattgttctcggcacggcaacgacgcgcgcctccggtgccaatgccattgcgatcggg
aatgcagcgtccgccgttggcccgagcgccactgccgttggtgcgtatgcttcggccact
ggaaatgaagcgcttgctttcggtgcggaggcagaagccgacggtattcattcggttgcc
atcggatcacaggcgcaggcgctcaacaccaatgcgatagcaatcgggcgcgaatccgac
gcactcggcgagtatgcggtcggcatcggttccggcgcagaggcgagaggcaatctgggg
accgcggttggcaacaatgcgctcgcccgacaaggcgataccgcgttgggcgcaggcgcg
ctggacggcacgatctcttcgggatcgacggttgcggtcggttatggcgccggccaggga
gccggcgatgtctcgcgcagtacgtttgtcggtgcttttgccggggcggaatcgcagggc
acgcagaacagcttcagtggctatttcggcggcgcggcagcgatagggaacaacaacgtc
gcgcatggggtcgcagcaggcgcggctgtaacgggcgacaacaatgtttcgatcggcaat
caggccggaacacaggcgcagatcgacagcaacggcaatcctgtcgggacgcttgggtct
gcatataaccgcgccgtcaacatcggtcaggatacccgcggcctcgccgacgatgcggtc
gccatcgggaccgatgctgcggcagttgaacgggcggtcgcgatcggaacggacgcgtcc
gcactgggccaggatggtgtggctgtcggggcgagcgcgacgtcgggagccacgggctac
aatgtcgccatcggcgcaggcggaacatcggcgaacgccaattcaacaaatgaaggggcc
gtcgcgatcggcgtcagtcaatttgccacgggtgatggcgccgttgccctcggttcttat
aatacggcgactggcgacgggtcggtcgctatcggccgtgtgagcttcgcaaccggcgac
gggtcgctcgccctgggggacagcgtcacggccagcggcaaccgtgcagtcgcgctcggg
acaacatcgagtgcaatggccgacagtggggtcgcgcttggtaatggcgcaaaggcggat
tctggtgacagtgctgttgcaatcggccgcatcgcaaatgcatccggcgcttttgccatc
gcgatgggtgatagcgccagggcatcggcggaagatgccctggcattcggatcgaacgcg
cagagcagcggtatcggcagtattgcggtcgggctgggaagccaggtttcaggagaccag
tcgatcgcgatcggtgtcgggcatgacgtgtcgggggatcggtcgggtgcctttggcgat
ccgaccacgatcaccggcaacgacagctatgccatcggcaacgacaatgtgatcgacgcc
gatcaggccttcgttctgggcaataatgtcaccatcgctgcgggcaccgatcgcgccgtt
tccttggggcataacagcaatgtaacagtcgccgacggcgtcgccctcggtgccggatcg
atcgccgatacggtcgtcgggactgcctctgcgacgatcaacggcacgacctataatttt
gcgggagccgttccgctcagcacggtaagcgtgggaagcgtcggtaacgagcggacgatt
accaatctcgcggccggacgcgtcagtgcgacgagcaccgacgcgatcaatggttcccag
ctctttgcgacgaaccaggcggtggaggcgagcaagacgcattacgtcagcatcaacgac
gcaggccagattttgggctcgggcaactataacaacgatggcgcgaccggacttggcgcg
attgcaatcggcacaaacgcctctgctcaaggtactttgagtgtggcattcggttttcag
tccaggtcggtcgggcgggaatcgatctcggttggctggaacgccacttcggcgggcaat
tccgagatccatatcggtaccgagtccgggctcggcggggtcagcaccaacgtaacgaat
atcggtatcggcattcggactggccagaatgtgaggggaacggcgaataccgcaatgggc
tggcaggcgggcaaccaggtcacgggcgacctgaacgtggcgctgggccggcagtccggc
atgaacgtgacgggatcattcaatacagctcttggtgcctataccggacaaaatgtaacg
ggtgcatcgaacattgccctcggtaatctggcagggaacggcatcaccgcgagcgatacg
gtttcaatcggcagcaactctgtcgccggcgcacaaaatggtgacgtcgctctcgggcgg
ggcagtgtcactgcggtggttgcggggacggcgagcagcgtcaacaacggcattacctac
aattatgcgggtattgccccgaccagtacggtcagcatcggcaatcttggggctgaacgc
acaatcaccaatgtggcggcaggacgcgtttcatcgaccagcaccgatgctgtcaatggc
tcgcaactctttgccacgaatacggcagtcggcaatctggcacaaagcatcgccggtggc
atgagcagcagctcctatgtgaatcccgacggctcggtgacgacggcgctgaatgttggc
gggaccacctacaacaatgtccaggatgcgttgacgcagctcaatgccaccgccggtgca
ggctggaatatcagtgcacagggtgcgaacgcgaccaatgtggccgccggcagcgcgacg
ggatcgaccgtcgacttcaagagcagcgacggcaatgtcgtcgtctccaaggacacggcg
aacaacgatatcgagtttgcgctggccgacgacatcacggtggacagcgtcaccgccggt
aacacgacggtggacaccagcggggtaagcatcgccggcggtccgaacggcacggtgtcg
ctgaccggcaacggtctcgacaatggcgggaaccggatcaccaatgtcgcggcgggtacc
gcagcgaccgacgcggtgaacgtcggtcagctcaacgccgcagtcggcagcgtcaatatc
ggctttgcaggcaactcgggtgcgaatatcacgcggtcgagcggtcaggtgctcgttatc
cagggcggcgggacgacgaccgggagctactcgggcggcaatatccgtaccgtgaccgat
cccggaagcggcgccatcaacatcgagatggccgaagcgccgaagttcggtaccgtcacg
gtcaatgacggcgggaccggcaagataacgggcgtcacggcggcaaccctgtcgtcgacc
agcaccgaggccgtgaatggcagccagcttcatgccaccaatcaagcggtcgcagccgcc
acgcaggccgcaaatgcgggatggaacctgaccgatgcgaacggcaacgccgcaaacatc
ggcccggatggcaacgtcgtcttcgagggtgacggtaatatccgtgtgacccagacaggc
gccgacgacgatggcaagatcgaggttgcgcttgccgacgatatcacggtggacagcgtc
actgccggcaacacgacgctggataccagcggcgtgagcatcgcgggtggtcccagcggc
acggtgtcgctgaccggcagcggtctcgataacggcgggaaccggatcaccaatgtcgcg
gcaggcgtgatcggcgcggcttcgaccgacgcggtgaacgggtcgcagctctttgcgctc
gggaacagcacggcttcgtcgctgggcggcggatcgagctataatccgagcacgggccag
gtcgtcgcttcgctttcggttggcgggaccacctacaacaatgtgcaggatgcgttgacg
cagctcaatgccaccgccggtgcaggctggattatcagcgcgcagggtgcgaacgcgacc
aatgtggccgccggcagcgcaacgggatcgaccgtcgacttcaagagcagcgacggcaat
gtcgtcgtctccaagggcacagcgagcaacgatatcgagtttgcgctggccgacgacatc
acggtggacagcgtcaccgccggtaacacgacggtggacaccagcggggtaagcatcgcc
ggcggtccgaacggcacggtgtcgctgaccggcaacggtctcgacaatggcgggaaccgg
atcaccaatgtcgcggcgggtaccgcagcgaccgacgcggtgaacgtcggtcagctcaac
gccgcagtcggcagcgtcaatatcggctttgcaggcaactcgggtgcgaatatcacgcgg
tcgagcggtcaggtgctcgttatccagggcggcgggacgacgaccgggagctactcgggc
ggcaatatccgtaccgtgaccgatcccggtagcggcgccatcaacatcgagatggccgaa
gcgccgaagttcggtaccgtcacggtcaatgacggcgggaccggcaagataacgggcgtc
acggcggcaaccctgtcgtcgaccagcaccgaggccgtgaatggcagccagttggtggca
ttgggggacagcatcgcggcctcgttgagcccgggctcgacatacaaccctgcgaccaac
agcatcacggcgcaaatcgtcgtcggaaacaatgtctacagcaatgtgcaggacgcgttg
caggccataacggtcaatggcggtggcggcggttggacgctggcgagcggcgtgaacggg
tcaggcgtagtgacgggcgatgcttcggcatcgatcgcacccggcgcgacggcgactttc
gtcgccggcaacaatatgacgatcaaccagagcggcggcgccctggagcttgcgctcaat
cccaacctgacgggaattcagagcattgcaatcaccggcggcccgacgatcaacggaaac
ggcatcgatatgggcggtgaccggattaccaatgtcggcgcgggtgttgcgccaaccgat
gcggtcaatctggggcagatgaatgccgggctagcgaacacgctcggtcaggccaaccgt
tataccgatacggcaatcgccgaccttcgcttcgatctgacccgttatcggcgcgatgcc
aatggcggcacggctgcggcgatggcgatgagccaggtgccgcaggctttcgagcccggt
atggggatcgcgggcatcggcatgtcgacctggcagggcgagcaggcgattgcattcggc
atttcgaaggcatccgacaacgggcgcgtcgttgtgcgagcgaccggctcctataacagc
cgcagcgaaggcggtgcggccgtaggtgtcgggttccagttctga
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