Sphingopyxis sp. BSN-002: L7H23_17590
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Entry
L7H23_17590 CDS
T10439
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spbs Sphingopyxis sp. BSN-002
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spbs03009
]
L7H23_17590 (rimO)
Enzymes [BR:
spbs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L7H23_17590 (rimO)
Ribosome biogenesis [BR:
spbs03009
]
Prokaryotic type
ribosomal protein modification factors
L7H23_17590 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
UKK84359
LinkDB
All DBs
Position
complement(3553243..3554613)
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AA seq
456 aa
AA seq
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MTVKTLPTQPKVGMVSLGCPKALVDSERILTKLRADGYGLSPDYAGADVVLVNTCGFLDS
AKEESLEAIGEAMAENGRVIVTGCMGNEAEVIRARFPNVLAVTGAHQYEQVVDAVHDAAP
PTQGPFIDLVPEGGLKLTPRHYSYLKISEGCNHSCSFCIIPDLRGKLVSRRIDAVLREAE
KLVAAGTKELLVISQDTSAYGVDIKHDPRQWHGREVRAHMTDLARELGQLRTSEGRAPWT
RLHYVYPYPHVDAVIPLMAEGLLTPYLDIPFQHASPSVLKRMKRPANEAKVLERLKAWRA
IAPDISIRSSFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVAGAQANALDNPVPE
EVKEERYQRIMAKTAAISAAKLEAKIGRTLPVIIDEVGEADDDGSIGATGRSQADAPEID
GHVYLRDVAATLKAGDIVDVEIEDADEHDLFGVVTA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcaaaaccctccccacccagccgaaggtcggcatggtttcgctcggctgcccg
aaggcgctcgtcgacagcgaacggattctcaccaagctgcgcgccgacggctatggcctc
tcgcccgactatgcgggcgccgacgtcgtgctcgtcaacacctgcggcttcctcgattcc
gccaaggaagaaagcctcgaagcgatcggcgaagcgatggccgagaacggccgcgtcatc
gtcaccggctgcatgggcaacgaggccgaggtcatccgcgcgcgtttcccgaacgtcctc
gcggtcaccggcgcgcatcagtatgagcaggtcgtcgacgccgtccatgatgccgcgccg
ccgacgcaaggccccttcatcgacctcgtccccgagggcgggctgaagctgaccccgcgc
cattacagctatctgaagatcagcgaaggctgcaaccacagctgctccttctgcatcatc
cccgacctgcgcggcaaactcgtcagccgccgcatcgacgcggtactgcgcgaggccgaa
aagctcgtcgctgcgggcacgaaggaactgctggtgatcagccaggacacctcggcctat
ggtgtcgatatcaagcacgacccgcgccagtggcacggccgcgaggtgcgcgcgcatatg
accgacctcgcccgcgaactcggccaactccgtaccagcgaaggccgcgcgccgtggacg
cgccttcactatgtctatccgtacccgcacgttgacgctgtcatcccgctgatggccgaa
gggctgctgacgccctacctcgacatccccttccagcacgcaagcccgagcgtcctcaag
cgcatgaagcgccccgcgaacgaggcgaaggtgctcgaacggctgaaggcgtggcgcgcg
atcgcccccgacatctctatacgctcgagcttcgttgtcggcttccccggcgagaccgaa
gcggatttccagtatctcctcgactggctcgacgaagcgcagctcgaccgcgtcggcgcc
ttccgcttcgaacccgtcgcgggcgcgcaggccaatgcgctcgacaatccggtgcccgaa
gaggtcaaggaagagcgctaccagcgcatcatggccaaaaccgccgcgatcagcgcggcg
aagcttgaggccaagatcggccgcacgctccccgtgatcatcgacgaagttggcgaagcc
gacgacgacggcagcatcggcgccaccggccgcagccaggccgacgcgccggagatcgac
ggccatgtctatctgcgtgacgtcgcggcgacgctgaaagcgggcgatatcgtcgacgtc
gagatcgaggatgccgacgagcacgacctgttcggggtcgtgaccgcctga
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