Sphingopyxis sp. BSN-002: L7H23_18330
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Entry
L7H23_18330 CDS
T10439
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
spbs Sphingopyxis sp. BSN-002
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spbs03032
]
L7H23_18330
03036 Chromosome and associated proteins [BR:
spbs03036
]
L7H23_18330
03400 DNA repair and recombination proteins [BR:
spbs03400
]
L7H23_18330
DNA replication proteins [BR:
spbs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L7H23_18330
Chromosome and associated proteins [BR:
spbs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
L7H23_18330
DNA repair and recombination proteins [BR:
spbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
L7H23_18330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Peptidase_M35
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UKK84501
LinkDB
All DBs
Position
3707793..3708065
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AA seq
90 aa
AA seq
DB search
MNKQDLIAAVADSSGLTKGDASKAVEAVFDAITGSLKKGGEVRLVGFGTFAVSKRKASTG
RNPRTGETMTIAASNQPKFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaagacctgatcgccgccgtcgctgactcgagcggcctgacgaagggtgac
gcgagcaaggccgtcgaagccgtcttcgacgcgatcacgggctcgctgaagaagggcggc
gaagttcgtctcgtcggcttcggcacctttgctgtcagcaagcgcaaggcctcgaccggt
cgcaacccgcgcaccggcgaaacgatgaccatcgcggcgtcgaaccagccgaagttcaag
gccggcaaggccctcaaggacgccgtcaactaa
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